Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HERC6Q8IVU3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AC032011.1-201ENST00000611703 1549 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 SNORA60-201ENST00000362396 134 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 SNORA5A-201ENST00000384111 134 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 U8.11-201ENST00000384699 133 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 U8.12-201ENST00000384701 133 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 RNU6-837P-201ENST00000391056 108 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 PTP4A1P5-201ENST00000420305 455 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 FNDC3CP-201ENST00000420795 1155 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 MTCO2P5-201ENST00000422621 426 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 GLRXP1-201ENST00000423261 334 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AL606662.1-201ENST00000445763 553 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AL133217.1-201ENST00000450980 425 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 U8.18-201ENST00000459285 133 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 MTCO3P44-201ENST00000510977 541 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AC093853.1-201ENST00000515689 483 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 RNU6-150P-201ENST00000516237 95 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 SNORA70.24-201ENST00000517233 118 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AC008694.2-201ENST00000517591 306 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AC107954.1-201ENST00000565906 727 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AF131215.7-201ENST00000602443 707 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AC124312.4-201ENST00000605533 310 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 AC025588.4-201ENST00000615802 908 ntBASIC4.41□□□□□ -1.7
HERC6Q8IVU3 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.41□□□□□ -1.7
HERC6Q8IVU3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.4□□□□□ -1.7
HERC6Q8IVU3 AC097714.1-201ENST00000511272 1647 ntBASIC4.4□□□□□ -1.7
HERC6Q8IVU3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HERC6Q8IVU3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 RNU6-462P-201ENST00000362659 105 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 Y_RNA.493-201ENST00000384422 102 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 RPL31P1-201ENST00000398116 372 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 AL031679.1-201ENST00000400616 525 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 MTATP6P27-201ENST00000416987 621 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 AL161631.1-201ENST00000417933 486 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 AL365203.2-201ENST00000423444 196 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 MTCYBP39-201ENST00000437562 491 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 NANOGP10-201ENST00000453325 895 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 ART2BP-201ENST00000453501 499 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 SUMO2P2-201ENST00000456482 255 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 PHBP17-201ENST00000528576 541 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 MIR5684-201ENST00000585074 65 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 AP000811.1-201ENST00000603803 651 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 AC019278.1-201ENST00000623516 479 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 DCAF13P1-201ENST00000495256 1330 ntBASIC4.4□□□□□ -1.71
HERC6Q8IVU3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.4□□□□□ -1.71
HERC6Q8IVU3 AP000526.1-201ENST00000603308 1388 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms