Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NUDCD3Q8IVD9 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 RNU4-35P-201ENST00000362588 141 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 RN7SKP280-201ENST00000364196 304 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 RNU1-64P-201ENST00000365443 163 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 AL359837.1-201ENST00000381357 287 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 RNU6-468P-201ENST00000384003 109 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 RNU6-207P-201ENST00000384137 107 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 MIR649-201ENST00000384843 97 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 GSTA8P-201ENST00000404253 637 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 HMGN2P20-201ENST00000437531 273 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 AC000041.1-201ENST00000439655 175 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 NOTCH2P1-201ENST00000443481 624 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 RPL7P5-201ENST00000471472 736 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 OR4A45P-201ENST00000529954 901 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 AC006518.2-201ENST00000542513 940 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 OR4H12P-201ENST00000556269 907 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 RPL21P136-201ENST00000605378 396 ntBASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.19□□□□□ -1.9
NUDCD3Q8IVD9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 MAPK10-362ENST00000641864 4484 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 MTCO2P31-201ENST00000402702 684 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 RNU4-78P-201ENST00000410940 126 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 DPPA2P1-201ENST00000428060 556 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC073063.1-201ENST00000434352 607 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 ELOCP13-201ENST00000443934 329 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC044797.1-201ENST00000445744 679 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC104073.1-201ENST00000451988 151 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 RBMY2UP-201ENST00000453474 324 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 snoU13.3-201ENST00000459441 104 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 MTCO3P35-201ENST00000485582 781 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC118282.2-201ENST00000508739 374 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC104619.4-201ENST00000510773 249 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 MTCO2P32-201ENST00000514865 403 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 SNORA26.10-201ENST00000516427 141 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC106785.1-201ENST00000565935 262 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AL162713.1-201ENST00000604480 262 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC002487.1-201ENST00000604565 994 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC004832.5-201ENST00000608677 401 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AL590282.1-201ENST00000610379 1136 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC084824.5-201ENST00000612009 413 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AL390240.1-201ENST00000612950 384 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AL157817.1-201ENST00000614264 790 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC068722.2-201ENST00000618734 544 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC068880.4-201ENST00000623082 495 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 AC093875.1-201ENST00000623688 504 ntBASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NUDCD3Q8IVD9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms