Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 AC007424.1-203ENST00000554613 687 ntBASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 AC010591.1-201ENST00000603941 649 ntBASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 AC010680.4-201ENST00000605334 543 ntBASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 AL133255.1-201ENST00000606374 441 ntBASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 AC090948.1-201ENST00000607464 549 ntBASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 AC093799.2-201ENST00000610062 578 ntBASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 MIR6130-201ENST00000619419 109 ntBASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 AL360270.2-201ENST00000562952 5985 ntBASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 AC006020.1-201ENST00000420179 1854 ntBASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NPAS4Q8IUM7 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 SNORD56.6-201ENST00000384569 71 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AC013442.1-201ENST00000397347 228 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AL078599.1-201ENST00000402075 293 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 RN7SKP159-201ENST00000410657 292 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 RNA5SP107-201ENST00000411358 122 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 RPL12P9-201ENST00000412942 488 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 OR2AH1P-201ENST00000425717 928 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 RPS15AP9-201ENST00000439856 381 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 HMGB3P9-201ENST00000441799 583 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 RNU7-182P-201ENST00000459009 62 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AC097484.1-201ENST00000471148 389 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 RPL38P4-201ENST00000502376 214 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AC116562.3-201ENST00000506136 177 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AC108043.1-201ENST00000512696 574 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 RNU6-64P-201ENST00000517119 105 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AC008694.2-201ENST00000517591 306 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 HMGB1P41-201ENST00000520234 440 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AP003080.1-202ENST00000526526 915 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AC068587.5-201ENST00000528506 175 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 SNORD84-203ENST00000584275 78 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 RMST_3.1-201ENST00000611651 109 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AC091905.4-201ENST00000623432 202 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 AC092747.4-201ENST00000620519 1861 ntBASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.74□□□□□ -1.49
NPAS4Q8IUM7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AC114774.1-201ENST00000507410 1770 ntBASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 U3.3-201ENST00000362986 216 ntBASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 RNU6-1249P-201ENST00000363237 111 ntBASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 SNORA56-201ENST00000383966 129 ntBASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AC005094.1-201ENST00000440420 368 ntBASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 GMFBP1-201ENST00000467831 427 ntBASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AC233702.1-201ENST00000482905 502 ntBASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 AC058823.1-201ENST00000485315 474 ntBASIC5.73□□□□□ -1.49
NPAS4Q8IUM7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms