Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AL450326.2-201ENST00000421913 1962 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP48Q86UV5 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP48Q86UV5 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP48Q86UV5 Y_RNA.70-201ENST00000362886 110 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 RNU6-1103P-201ENST00000384150 107 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AL359643.1-201ENST00000404109 423 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 BTBD10P2-201ENST00000404779 676 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AL359704.1-201ENST00000411586 781 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 RPL31P2-201ENST00000413849 377 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.84□□□□□ -1.47
USP48Q86UV5 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.84□□□□□ -1.47
USP48Q86UV5 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.84□□□□□ -1.47
USP48Q86UV5 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.84□□□□□ -1.47
USP48Q86UV5 OR4F13P-201ENST00000428478 931 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 RPL12P46-201ENST00000436610 195 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 GEMIN8P3-201ENST00000445417 720 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AMD1P1-201ENST00000457220 922 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 snoU13.8-201ENST00000458890 104 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AL591473.1-201ENST00000464297 313 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AC090686.1-201ENST00000481577 749 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 RN7SL441P-201ENST00000492388 296 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 SCARNA22-201ENST00000503991 125 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AC093853.1-201ENST00000515689 483 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.84□□□□□ -1.47
USP48Q86UV5 AC024224.1-201ENST00000538284 609 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.84□□□□□ -1.47
USP48Q86UV5 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.84□□□□□ -1.47
USP48Q86UV5 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.84□□□□□ -1.47
USP48Q86UV5 AL845331.3-202ENST00000562856 261 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 HMGB1P33-201ENST00000563485 527 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AC090615.1-201ENST00000577519 154 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.84□□□□□ -1.47
USP48Q86UV5 AC008782.1-201ENST00000603386 430 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AL139286.1-201ENST00000604465 483 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AL161734.1-201ENST00000609720 557 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AC009268.2-201ENST00000621925 457 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AL732618.1-201ENST00000623251 301 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 AC011944.2-201ENST00000624440 683 ntBASIC5.84□□□□□ -1.47
USP48Q86UV5 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.84□□□□□ -1.47
USP48Q86UV5 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
USP48Q86UV5 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
USP48Q86UV5 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP48Q86UV5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.84□□□□□ -1.47
USP48Q86UV5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
USP48Q86UV5 AC104118.1-201ENST00000607625 1589 ntBASIC5.84□□□□□ -1.48
USP48Q86UV5 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.84□□□□□ -1.48
USP48Q86UV5 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
USP48Q86UV5 AC090971.4-201ENST00000560291 1800 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
USP48Q86UV5 Z95331.1-201ENST00000623075 23112 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.83□□□□□ -1.48
USP48Q86UV5 AC126323.6-202ENST00000568092 3511 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 AC008033.1-201ENST00000216407 1162 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP48Q86UV5 RNY4P14-201ENST00000363656 96 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 Y_RNA.813-201ENST00000364639 102 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
USP48Q86UV5 Y_RNA.402-201ENST00000383972 102 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 MIR134-201ENST00000385258 73 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 U3.30-201ENST00000391308 210 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 RN7SKP285-201ENST00000410137 318 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.83□□□□□ -1.48
USP48Q86UV5 RPL36AP36-201ENST00000418616 301 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.83□□□□□ -1.48
USP48Q86UV5 AL358176.3-201ENST00000420757 454 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.83□□□□□ -1.48
USP48Q86UV5 RPL31P35-201ENST00000431058 377 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.83□□□□□ -1.48
USP48Q86UV5 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.83□□□□□ -1.48
USP48Q86UV5 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.83□□□□□ -1.48
USP48Q86UV5 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.83□□□□□ -1.48
USP48Q86UV5 AL356276.2-201ENST00000435919 558 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 AC098614.3-201ENST00000438957 440 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 AL662791.1-201ENST00000441992 928 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 RPL7P52-201ENST00000449200 742 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 RPS5P7-201ENST00000456664 608 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 AC011276.1-201ENST00000469688 323 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 AC023598.1-201ENST00000472521 361 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 AC007182.2-201ENST00000489251 402 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 RN7SL604P-201ENST00000492589 296 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.83□□□□□ -1.48
USP48Q86UV5 AC114967.1-201ENST00000504890 259 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 AC117522.1-201ENST00000509821 380 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.83□□□□□ -1.48
USP48Q86UV5 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.83□□□□□ -1.48
USP48Q86UV5 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.83□□□□□ -1.48
USP48Q86UV5 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.83□□□□□ -1.48
USP48Q86UV5 AC009101.1-201ENST00000568135 242 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 MIR4512-201ENST00000583257 77 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.83□□□□□ -1.48
USP48Q86UV5 AC007566.2-201ENST00000603642 413 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.83□□□□□ -1.48
USP48Q86UV5 AC121334.2-201ENST00000605387 271 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 BX664608.1-201ENST00000610519 487 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 MIR8069-1-201ENST00000616627 86 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 AC006338.1-201ENST00000618453 749 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USP48Q86UV5 MIR8069-2-201ENST00000621412 86 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms