Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 Y_RNA.192-201ENST00000363977 102 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 MIR670-201ENST00000390142 98 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 HSPE1P26-201ENST00000405341 275 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 RPL7AP73-201ENST00000413490 353 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AL035246.1-201ENST00000433554 1255 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 MTND4LP10-201ENST00000435146 291 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 RPS17P13-201ENST00000448974 407 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 MTND2P19-201ENST00000449129 1012 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 HMGB1P15-201ENST00000453854 435 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 RPL7P15-201ENST00000461190 712 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 VN1R17P-201ENST00000472048 1090 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 FAM172BP-201ENST00000487497 1089 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 TRAV31-201ENST00000502780 342 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 TMEM251P1-201ENST00000503717 318 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 HMGB1P22-201ENST00000505315 124 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 XKRY-201ENST00000510392 1100 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AC116353.3-201ENST00000511215 249 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 RNU6-415P-201ENST00000516252 97 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 CYCSP30-201ENST00000546447 172 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 HSPE1P3-201ENST00000559254 309 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 MIR3690-201ENST00000580266 75 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AC107075.1-201ENST00000613695 314 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AC013470.4-201ENST00000619978 986 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AL139089.1-201ENST00000620372 975 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 CR392039.5-201ENST00000623201 510 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AC231657.1-201ENST00000624313 397 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 AC116618.1-201ENST00000634617 774 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 OR8B1P-202ENST00000641132 1178 ntBASIC3.99□□□□□ -1.77
PRPF39Q86UA1 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF39Q86UA1 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AC008725.1-201ENST00000605123 2263 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 OR5BR1P-201ENST00000524992 1330 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AL161912.2-201ENST00000565707 3007 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AL049780.3-201ENST00000624612 1583 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 SNORD51-201ENST00000384320 80 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 MIR30B-201ENST00000384850 88 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 HMGN2P8-201ENST00000391458 268 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 CYP4F29P-201ENST00000420685 446 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AC018644.1-201ENST00000429934 551 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 MTND2P5-201ENST00000432656 1006 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AL500522.2-201ENST00000448562 343 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AC005297.2-201ENST00000450430 606 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 RPL21P134-201ENST00000453468 483 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 snoU13.4-201ENST00000458916 104 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AC091564.1-201ENST00000464563 479 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 ST13P14-201ENST00000474095 734 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 RPS4XP13-201ENST00000483219 789 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 WBP1LP4-201ENST00000505043 344 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 RNY4P37-201ENST00000516225 96 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AC022861.1-201ENST00000522981 663 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AC091515.1-201ENST00000548110 679 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AC090695.1-201ENST00000561269 1222 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 BNIP3P22-201ENST00000593399 556 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.98□□□□□ -1.77
PRPF39Q86UA1 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF39Q86UA1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms