Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB1Q86U70 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LDB1Q86U70 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LDB1Q86U70 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB1Q86U70 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDB1Q86U70 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LDB1Q86U70 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB1Q86U70 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LDB1Q86U70 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB1Q86U70 RNU6-213P-201ENST00000384051 104 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 DHFRP6-201ENST00000401776 268 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.81□□□□□ -1.8
LDB1Q86U70 AC092017.2-201ENST00000427600 362 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 PSMA6P3-201ENST00000428242 164 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.81□□□□□ -1.8
LDB1Q86U70 MRPS18BP2-201ENST00000434310 759 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB1Q86U70 AL354941.1-201ENST00000438600 464 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 MTCYBP31-201ENST00000438855 1122 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 HSFY6P-201ENST00000445573 403 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 HMGN2P21-201ENST00000447764 270 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB1Q86U70 AC084198.1-201ENST00000477747 402 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 AP000926.1-201ENST00000479573 241 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB1Q86U70 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.81□□□□□ -1.8
LDB1Q86U70 AC147055.4-201ENST00000504399 745 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB1Q86U70 BTF3L4P4-201ENST00000506381 449 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 AC020593.1-201ENST00000507399 299 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 RN7SKP21-201ENST00000516503 220 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 RNA5SP143-201ENST00000516936 115 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.81□□□□□ -1.8
LDB1Q86U70 AC022861.1-201ENST00000522981 663 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.81□□□□□ -1.8
LDB1Q86U70 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.81□□□□□ -1.8
LDB1Q86U70 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB1Q86U70 UBE2NP1-201ENST00000545592 458 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB1Q86U70 MIR5186-201ENST00000577504 120 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB1Q86U70 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LDB1Q86U70 FP236240.3-201ENST00000623061 327 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 AC004943.3-201ENST00000624116 600 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 AC017037.3-201ENST00000625016 472 ntBASIC3.81□□□□□ -1.8
LDB1Q86U70 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB1Q86U70 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LDB1Q86U70 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LDB1Q86U70 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.81□□□□□ -1.8
LDB1Q86U70 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LDB1Q86U70 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LDB1Q86U70 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LDB1Q86U70 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LDB1Q86U70 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LDB1Q86U70 SGO1P2-201ENST00000429458 1589 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB1Q86U70 AL356473.1-201ENST00000406203 1408 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
LDB1Q86U70 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB1Q86U70 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB1Q86U70 DDX43P2-201ENST00000604753 1354 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDB1Q86U70 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB1Q86U70 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB1Q86U70 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LDB1Q86U70 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LDB1Q86U70 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LDB1Q86U70 RNA5SP97-201ENST00000365006 84 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 MIR199A2-201ENST00000385289 110 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 RN7SKP177-201ENST00000410567 355 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 RNU2-15P-201ENST00000410692 191 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 RN7SKP263-201ENST00000411194 309 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB1Q86U70 AC244098.2-201ENST00000422068 99 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDB1Q86U70 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 ATP5HP2-201ENST00000433885 485 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB1Q86U70 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDB1Q86U70 AF228730.2-201ENST00000438784 848 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 HSPE1P28-201ENST00000443139 211 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 SUMO2P2-201ENST00000456482 255 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 OR9M1P-201ENST00000459641 921 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDB1Q86U70 AC068587.2-201ENST00000478386 781 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.8□□□□□ -1.8
LDB1Q86U70 RPL5P23-201ENST00000496040 868 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 AC010625.1-201ENST00000511296 403 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.8□□□□□ -1.8
LDB1Q86U70 SCARNA14-201ENST00000516903 136 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
LDB1Q86U70 UBTFL10-201ENST00000528532 562 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms