Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 PRELID3BP11-201ENST00000414230 479 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 AL513175.2-201ENST00000422071 443 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 AC019097.1-201ENST00000424783 735 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 HMGN2P21-201ENST00000447764 270 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 AP000705.1-201ENST00000454567 350 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 RPL31P50-201ENST00000471002 296 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 RPL31P13-201ENST00000484151 370 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 AC100870.1-201ENST00000522035 505 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 AC004486.1-201ENST00000546846 233 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 HMGB1P6-201ENST00000569046 646 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 MIR3670-2-201ENST00000582974 65 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 MIR3670-1-201ENST00000584160 65 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 MIR3670-3-201ENST00000584855 65 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 AL390838.2-201ENST00000602394 274 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 MIR3670-4-201ENST00000612260 65 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 AC231759.1-201ENST00000616455 597 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 AC090617.7-201ENST00000623952 126 ntBASIC3.18□□□□□ -1.9
CCDC171Q6TFL3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 RNU6-225P-201ENST00000384613 103 ntBASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 MTND4P13-201ENST00000402078 1023 ntBASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 RPL31P52-201ENST00000407532 367 ntBASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 RN7SKP222-201ENST00000410651 315 ntBASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 RPS20P25-201ENST00000412447 352 ntBASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 RPL30P3-201ENST00000424262 333 ntBASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 AC063976.3-201ENST00000426849 329 ntBASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 HMGB1P25-201ENST00000468402 607 ntBASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 KC877373.1-201ENST00000479066 408 ntBASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 AP003102.1-201ENST00000525638 661 ntBASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 AL035413.2-201ENST00000604801 525 ntBASIC3.17□□□□□ -1.9
CCDC171Q6TFL3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 RNU2-52P-201ENST00000410680 190 ntBASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 AC098592.2-201ENST00000413158 265 ntBASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 AC109583.1-201ENST00000432156 268 ntBASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 AL590103.1-201ENST00000434488 307 ntBASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 RSL24D1P2-201ENST00000445584 366 ntBASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 AL109933.2-201ENST00000452651 260 ntBASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 AC098799.2-201ENST00000509466 868 ntBASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 RNA5SP282-201ENST00000516355 108 ntBASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 AC103783.1-201ENST00000520506 373 ntBASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 MIR4298-201ENST00000584380 73 ntBASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC171Q6TFL3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.15□□□□□ -1.9
CCDC171Q6TFL3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 AC006378.2-201ENST00000623178 2476 ntBASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 MIR34A-201ENST00000385130 110 ntBASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 RNA5SP80-201ENST00000410475 111 ntBASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 MTCO3P21-201ENST00000430791 643 ntBASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 AP000936.2-201ENST00000447151 681 ntBASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 RN7SL432P-201ENST00000484057 298 ntBASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 AC123904.3-201ENST00000547218 814 ntBASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 SYF2P1-201ENST00000550658 413 ntBASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 AC103881.1-201ENST00000603476 538 ntBASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 AP000787.2-201ENST00000604432 568 ntBASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC171Q6TFL3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 AC110792.3-201ENST00000595906 1614 ntBASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 RNU1-100P-201ENST00000365255 165 ntBASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 MIR92A2-201ENST00000385299 75 ntBASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 RNA5SP210-201ENST00000391034 120 ntBASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 RPS4XP8-201ENST00000402039 771 ntBASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms