Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 MTCYBP36-201ENST00000404146 440 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC009302.1-201ENST00000417147 390 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC009237.2-201ENST00000421358 284 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 CHIAP3-201ENST00000423668 1133 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC093698.1-201ENST00000423843 571 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 RPL7P4-203ENST00000430239 730 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 WASF1P1-201ENST00000447560 1131 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 PAXBP1P1-201ENST00000449315 447 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC098824.1-201ENST00000453565 980 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AL121769.1-201ENST00000469473 401 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 UQCRHP4-201ENST00000471686 272 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AP000797.1-201ENST00000478870 387 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 RPL9P6-201ENST00000492764 598 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC105252.1-201ENST00000503089 286 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC091133.4-201ENST00000511142 308 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 RN7SKP298-201ENST00000515950 94 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 SLC2A13P1-201ENST00000531560 322 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 CYCSP29-201ENST00000533731 318 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC091489.2-201ENST00000566263 604 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 SNORA59B-202ENST00000578183 701 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC022884.3-201ENST00000579571 248 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 RN7SL600P-201ENST00000581811 299 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC012417.1-201ENST00000582307 1039 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC090312.2-201ENST00000582687 378 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 MIR4719-201ENST00000585233 84 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AL159169.3-201ENST00000608871 561 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 MIR6798-201ENST00000612887 67 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AL157786.1-207ENST00000627771 695 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AL773545.4-201ENST00000637262 310 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AL513478.4-201ENST00000641636 310 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC073544.1-201ENST00000600110 1595 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 AC010329.2-201ENST00000595195 2737 ntBASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF549Q6P9A3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 Y_RNA.97-201ENST00000363094 102 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 SNORA3C-201ENST00000408792 125 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 RNA5SP39-201ENST00000411245 120 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 RPL17P12-201ENST00000413391 526 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AL136133.1-201ENST00000413694 376 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 FCF1P2-201ENST00000415284 583 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AC092634.6-201ENST00000418558 192 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 KLF3P2-201ENST00000465138 268 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AC105137.1-201ENST00000484355 562 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 RPL31P61-201ENST00000496160 376 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AL358832.1-201ENST00000497800 389 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 RPS27AP13-201ENST00000498403 237 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AC108471.1-201ENST00000513977 287 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AP002748.2-201ENST00000528671 348 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AC124947.2-202ENST00000552735 133 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 MIR4284-201ENST00000578924 81 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 MIR5684-201ENST00000585074 65 ntBASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.04□□□□□ -1.76
ZNF549Q6P9A3 SEPT7P9-203ENST00000604116 343 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms