Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC091153.1-201ENST00000466297 402 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 RPL27AP5-201ENST00000469428 449 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.53□□□□□ -2
CCDC58Q4VC31 AC008565.1-201ENST00000509046 885 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 RNU6-319P-201ENST00000516025 108 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 SNORA31.11-201ENST00000516528 139 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 RNU1-45P-201ENST00000517191 141 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 RN7SKP40-201ENST00000517211 242 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.53□□□□□ -2
CCDC58Q4VC31 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.53□□□□□ -2
CCDC58Q4VC31 HIGD1AP5-201ENST00000529959 259 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 HPRT1P3-201ENST00000539521 576 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.53□□□□□ -2
CCDC58Q4VC31 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 MIR5680-201ENST00000577577 84 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.53□□□□□ -2
CCDC58Q4VC31 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.53□□□□□ -2
CCDC58Q4VC31 AL606834.2-201ENST00000602954 668 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 AC007566.2-201ENST00000603642 413 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 AC069200.1-201ENST00000609511 323 ntBASIC2.53□□□□□ -2
CCDC58Q4VC31 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.53□□□□□ -2
CCDC58Q4VC31 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC58Q4VC31 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CCDC58Q4VC31 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
CCDC58Q4VC31 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC58Q4VC31 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AC096644.4-201ENST00000563417 2912 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC58Q4VC31 SNORA54-201ENST00000384281 123 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 RNA5SP181-201ENST00000410246 98 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 RNA5SP38-201ENST00000410750 119 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 NUP35P2-201ENST00000416748 943 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AL513043.1-201ENST00000439124 535 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 RABEPKP1-201ENST00000440529 1026 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 NPM1P13-201ENST00000452663 865 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AC008716.1-201ENST00000511084 513 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 RNA5SP402-201ENST00000517148 110 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AP003385.6-201ENST00000531603 374 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AC012182.1-201ENST00000570133 895 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC58Q4VC31 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC58Q4VC31 TPMTP1-201ENST00000592307 737 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AC245036.5-201ENST00000596330 847 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AC015871.2-201ENST00000603605 948 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 NUTF2P8-201ENST00000604593 363 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 U73479.1-201ENST00000618062 168 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AP004607.9-201ENST00000618202 316 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 AP003072.5-201ENST00000623872 773 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC58Q4VC31 PABPC1P9-201ENST00000426076 1612 ntBASIC2.52□□□□□ -2.01
CCDC58Q4VC31 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC58Q4VC31 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AC099654.7-201ENST00000635788 2127 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 SNORA71.1-201ENST00000364523 117 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AL512633.1-201ENST00000399931 655 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AC016769.2-201ENST00000414815 475 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AC091390.1-201ENST00000433904 331 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 RPS15AP7-201ENST00000439294 405 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AC034236.1-201ENST00000469891 373 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AC068587.1-201ENST00000483613 781 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 MTND3P24-201ENST00000506306 329 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AC117522.3-201ENST00000507974 584 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 RNA5SP82-201ENST00000516707 92 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 ACTR3BP3-201ENST00000565577 979 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AC010620.2-201ENST00000600135 313 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AL136295.6-201ENST00000610486 658 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AC011472.4-201ENST00000615848 491 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 AL356863.1-201ENST00000623378 1080 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 CR381653.2-201ENST00000624041 768 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 PABPC1P7-201ENST00000413177 1513 ntBASIC2.51□□□□□ -2.01
CCDC58Q4VC31 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC58Q4VC31 MAPK10-266ENST00000641066 6555 ntBASIC2.5□□□□□ -2.01
CCDC58Q4VC31 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC58Q4VC31 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC58Q4VC31 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.5□□□□□ -2.01
CCDC58Q4VC31 MIR6073-201ENST00000352083 89 ntBASIC2.5□□□□□ -2.01
CCDC58Q4VC31 RNU6-629P-201ENST00000384061 103 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms