Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HIST1H3AP68431 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 SNORA38.1-201ENST00000364172 131 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 SNORA71.1-201ENST00000364523 117 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 RNU6-891P-201ENST00000384280 111 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 RPS3AP26-201ENST00000398259 784 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 MIR1303-201ENST00000408625 86 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 U3.42-201ENST00000408746 214 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 RNU4-65P-201ENST00000410473 140 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 AL139281.1-201ENST00000422120 335 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 AL390023.1-201ENST00000428836 262 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 AC104332.2-201ENST00000429959 156 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 AL445669.2-201ENST00000454425 421 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 RPS29P2-201ENST00000479278 136 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 AC126121.1-201ENST00000482313 553 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 OR2A20P-203ENST00000498397 1268 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 AC004062.1-201ENST00000509926 645 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 OR5G4P-201ENST00000525251 760 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HIST1H3AP68431 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 SRGNP1-201ENST00000603392 451 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 AL110115.1-201ENST00000614396 364 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 AC090617.7-201ENST00000623952 126 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 AC020923.1-201ENST00000624021 917 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.59□□□□□ -1.99
HIST1H3AP68431 AC096644.4-201ENST00000563417 2912 ntBASIC2.59□□□□□ -1.99
HIST1H3AP68431 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
HIST1H3AP68431 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -2
HIST1H3AP68431 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
HIST1H3AP68431 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HIST1H3AP68431 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HIST1H3AP68431 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.58□□□□□ -2
HIST1H3AP68431 MIR421-201ENST00000365696 85 ntBASIC2.58□□□□□ -2
HIST1H3AP68431 CD24P4-201ENST00000382840 243 ntBASIC2.58□□□□□ -2
HIST1H3AP68431 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.58□□□□□ -2
HIST1H3AP68431 RPS29P6-201ENST00000438196 145 ntBASIC2.58□□□□□ -2
HIST1H3AP68431 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.58□□□□□ -2
HIST1H3AP68431 RPL21P41-201ENST00000459863 264 ntBASIC2.58□□□□□ -2
HIST1H3AP68431 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.58□□□□□ -2
HIST1H3AP68431 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.58□□□□□ -2
HIST1H3AP68431 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.58□□□□□ -2
HIST1H3AP68431 RNU6-56P-201ENST00000516986 93 ntBASIC2.58□□□□□ -2
HIST1H3AP68431 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.58□□□□□ -2
HIST1H3AP68431 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.58□□□□□ -2
HIST1H3AP68431 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.58□□□□□ -2
HIST1H3AP68431 MTCO3P13-201ENST00000577757 781 ntBASIC2.58□□□□□ -2
HIST1H3AP68431 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.58□□□□□ -2
HIST1H3AP68431 AP001029.3-201ENST00000588063 596 ntBASIC2.58□□□□□ -2
HIST1H3AP68431 AC078899.3-201ENST00000599065 212 ntBASIC2.58□□□□□ -2
HIST1H3AP68431 NTAN1P1-201ENST00000603150 646 ntBASIC2.58□□□□□ -2
HIST1H3AP68431 AC079880.2-201ENST00000603790 1213 ntBASIC2.58□□□□□ -2
HIST1H3AP68431 AC107871.2-201ENST00000612894 502 ntBASIC2.58□□□□□ -2
HIST1H3AP68431 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.58□□□□□ -2
HIST1H3AP68431 AC091046.2-201ENST00000620775 665 ntBASIC2.58□□□□□ -2
HIST1H3AP68431 AC006111.3-201ENST00000622137 383 ntBASIC2.58□□□□□ -2
HIST1H3AP68431 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HIST1H3AP68431 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.58□□□□□ -2
HIST1H3AP68431 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.58□□□□□ -2
HIST1H3AP68431 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HIST1H3AP68431 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HIST1H3AP68431 SAGE4P-201ENST00000442271 3381 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 AC009487.2-201ENST00000420969 6821 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.57□□□□□ -2
HIST1H3AP68431 RNA5SP374-201ENST00000362939 125 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 RNU6-263P-201ENST00000363811 107 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.57□□□□□ -2
HIST1H3AP68431 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.57□□□□□ -2
HIST1H3AP68431 AC233728.2-201ENST00000425348 757 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
HIST1H3AP68431 RPL7P29-201ENST00000437151 728 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.57□□□□□ -2
HIST1H3AP68431 RPL39P40-201ENST00000445481 146 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.57□□□□□ -2
HIST1H3AP68431 AL162389.1-201ENST00000449233 177 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.57□□□□□ -2
HIST1H3AP68431 AL590639.1-201ENST00000456484 337 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 BX510359.1-201ENST00000456973 237 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.57□□□□□ -2
HIST1H3AP68431 AL136126.1-201ENST00000473603 402 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 AP004217.1-201ENST00000480579 346 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.57□□□□□ -2
HIST1H3AP68431 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.57□□□□□ -2
HIST1H3AP68431 OR4G1P-201ENST00000588632 938 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 AC012493.2-201ENST00000595083 291 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 AC006539.2-201ENST00000601729 572 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 AC131902.3-201ENST00000611767 581 ntBASIC2.57□□□□□ -2
HIST1H3AP68431 Z99129.2-201ENST00000619967 314 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms