Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 RNA5SP387-201ENST00000364226 106 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPS4XP62701 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPS4XP62701 AL450338.1-201ENST00000407987 512 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.35□□□□□ -1.87
RPS4XP62701 HMGB3P20-201ENST00000417997 600 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.35□□□□□ -1.87
RPS4XP62701 AC002075.2-201ENST00000425207 252 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 AL645638.1-201ENST00000440519 361 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.35□□□□□ -1.87
RPS4XP62701 MTCO2P25-201ENST00000447065 681 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 VN1R10P-201ENST00000447106 875 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 SLC31A1P1-201ENST00000451221 567 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 AC099563.1-201ENST00000456086 418 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.35□□□□□ -1.87
RPS4XP62701 PLGLA-201ENST00000465668 449 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 AC092757.1-201ENST00000467293 467 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPS4XP62701 AC008837.2-201ENST00000513076 418 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.35□□□□□ -1.87
RPS4XP62701 AP001636.2-201ENST00000525517 696 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 OR7E13P-201ENST00000526052 910 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
RPS4XP62701 AADACP1-206ENST00000561502 1193 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 AL049838.1-201ENST00000563647 981 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 AC087499.8-201ENST00000578406 226 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
RPS4XP62701 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.35□□□□□ -1.87
RPS4XP62701 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.35□□□□□ -1.87
RPS4XP62701 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.35□□□□□ -1.87
RPS4XP62701 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.35□□□□□ -1.87
RPS4XP62701 MTCO2P2-201ENST00000591258 225 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.35□□□□□ -1.87
RPS4XP62701 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.35□□□□□ -1.87
RPS4XP62701 AL163642.2-201ENST00000604722 1019 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 AC069304.2-201ENST00000605154 435 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 AC069200.1-201ENST00000609511 323 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 AC092184.1-201ENST00000625042 715 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 AL034408.1-202ENST00000636088 415 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 MTND2P41-201ENST00000637599 773 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RPS4XP62701 CEP170P1-201ENST00000502249 4587 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 ZNF285B-201ENST00000561698 1767 ntBASIC3.35□□□□□ -1.87
RPS4XP62701 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPS4XP62701 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPS4XP62701 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
RPS4XP62701 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.34□□□□□ -1.87
RPS4XP62701 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RPS4XP62701 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RPS4XP62701 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.34□□□□□ -1.87
RPS4XP62701 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.34□□□□□ -1.87
RPS4XP62701 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RPS4XP62701 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
RPS4XP62701 SNRPEP3-201ENST00000338402 276 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 MIR208A-201ENST00000362287 71 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 Y_RNA.333-201ENST00000365274 102 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 Y_RNA.408-201ENST00000383987 102 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 SNORA5A-201ENST00000384111 134 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 RNU6-821P-201ENST00000390995 107 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 AL391417.1-201ENST00000404100 426 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 AL590084.1-201ENST00000407885 387 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 RNU4-78P-201ENST00000410940 126 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.34□□□□□ -1.87
RPS4XP62701 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.34□□□□□ -1.87
RPS4XP62701 AL365396.1-201ENST00000430854 671 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.34□□□□□ -1.87
RPS4XP62701 MTND2P20-201ENST00000440805 661 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 PDSS1P2-201ENST00000449397 678 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.34□□□□□ -1.87
RPS4XP62701 RPS20P24-201ENST00000457473 361 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 UBDP1-202ENST00000457888 382 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 RPL31P13-201ENST00000484151 370 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 AC092045.1-201ENST00000495716 1231 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.34□□□□□ -1.87
RPS4XP62701 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.34□□□□□ -1.87
RPS4XP62701 RNU1-95P-201ENST00000516357 160 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 RNU1-128P-201ENST00000516704 160 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.34□□□□□ -1.87
RPS4XP62701 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RPS4XP62701 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.34□□□□□ -1.87
RPS4XP62701 AP004242.1-201ENST00000533701 349 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.34□□□□□ -1.87
RPS4XP62701 AL132657.2-201ENST00000564417 358 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.34□□□□□ -1.87
RPS4XP62701 AP001269.3-201ENST00000588718 329 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 BNIP3P24-201ENST00000593398 557 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.34□□□□□ -1.87
RPS4XP62701 uc_338.32-201ENST00000615087 172 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.34□□□□□ -1.87
RPS4XP62701 AP000553.6-201ENST00000641242 118 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 AC009093.8-201ENST00000641769 292 ntBASIC3.34□□□□□ -1.87
RPS4XP62701 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.34□□□□□ -1.87
RPS4XP62701 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
RPS4XP62701 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
RPS4XP62701 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RPS4XP62701 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
RPS4XP62701 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RPS4XP62701 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.33□□□□□ -1.88
RPS4XP62701 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
RPS4XP62701 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms