Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 RPL23AP15-201ENST00000450202 459 ntBASIC2.55□□□□□ -2
SPCS3P61009 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.55□□□□□ -2
SPCS3P61009 RPL21P13-201ENST00000488305 481 ntBASIC2.55□□□□□ -2
SPCS3P61009 RNF138P1-201ENST00000502765 546 ntBASIC2.55□□□□□ -2
SPCS3P61009 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.55□□□□□ -2
SPCS3P61009 RN7SKP43-201ENST00000516173 320 ntBASIC2.55□□□□□ -2
SPCS3P61009 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.55□□□□□ -2
SPCS3P61009 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.55□□□□□ -2
SPCS3P61009 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.55□□□□□ -2
SPCS3P61009 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.55□□□□□ -2
SPCS3P61009 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.55□□□□□ -2
SPCS3P61009 COX6CP3-201ENST00000580869 223 ntBASIC2.55□□□□□ -2
SPCS3P61009 MIR3670-2-201ENST00000582974 65 ntBASIC2.55□□□□□ -2
SPCS3P61009 MIR3670-1-201ENST00000584160 65 ntBASIC2.55□□□□□ -2
SPCS3P61009 MIR3670-3-201ENST00000584855 65 ntBASIC2.55□□□□□ -2
SPCS3P61009 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.55□□□□□ -2
SPCS3P61009 VN1R85P-201ENST00000601587 426 ntBASIC2.55□□□□□ -2
SPCS3P61009 AC092474.3-201ENST00000603022 568 ntBASIC2.55□□□□□ -2
SPCS3P61009 AC084036.1-201ENST00000609190 508 ntBASIC2.55□□□□□ -2
SPCS3P61009 AL161734.1-201ENST00000609720 557 ntBASIC2.55□□□□□ -2
SPCS3P61009 MIR3670-4-201ENST00000612260 65 ntBASIC2.55□□□□□ -2
SPCS3P61009 uc_338.25-201ENST00000613756 156 ntBASIC2.55□□□□□ -2
SPCS3P61009 AL121772.2-201ENST00000614331 297 ntBASIC2.55□□□□□ -2
SPCS3P61009 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.55□□□□□ -2
SPCS3P61009 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.55□□□□□ -2
SPCS3P61009 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.54□□□□□ -2
SPCS3P61009 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SPCS3P61009 OR1S2-201ENST00000302592 978 ntBASIC2.54□□□□□ -2
SPCS3P61009 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.54□□□□□ -2
SPCS3P61009 MIR142-201ENST00000384835 87 ntBASIC2.54□□□□□ -2
SPCS3P61009 MIR7-1-201ENST00000384871 110 ntBASIC2.54□□□□□ -2
SPCS3P61009 MT-TC-201ENST00000387405 66 ntBASIC2.54□□□□□ -2
SPCS3P61009 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.54□□□□□ -2
SPCS3P61009 RNA5SP274-201ENST00000410484 108 ntBASIC2.54□□□□□ -2
SPCS3P61009 RNU4-78P-201ENST00000410940 126 ntBASIC2.54□□□□□ -2
SPCS3P61009 HMGN1P24-201ENST00000412282 298 ntBASIC2.54□□□□□ -2
SPCS3P61009 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.54□□□□□ -2
SPCS3P61009 AC092447.6-201ENST00000414578 210 ntBASIC2.54□□□□□ -2
SPCS3P61009 SYF2P2-201ENST00000417620 583 ntBASIC2.54□□□□□ -2
SPCS3P61009 HSFY1P1-201ENST00000423928 1178 ntBASIC2.54□□□□□ -2
SPCS3P61009 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.54□□□□□ -2
SPCS3P61009 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.54□□□□□ -2
SPCS3P61009 RPL36P19-201ENST00000430744 301 ntBASIC2.54□□□□□ -2
SPCS3P61009 RPL36AP6-201ENST00000435770 321 ntBASIC2.54□□□□□ -2
SPCS3P61009 AL034418.1-201ENST00000448675 860 ntBASIC2.54□□□□□ -2
SPCS3P61009 MRPL35P4-201ENST00000453682 566 ntBASIC2.54□□□□□ -2
SPCS3P61009 AP000705.1-201ENST00000454567 350 ntBASIC2.54□□□□□ -2
SPCS3P61009 RPL37P25-201ENST00000507308 276 ntBASIC2.54□□□□□ -2
SPCS3P61009 MTND4LP31-201ENST00000514859 294 ntBASIC2.54□□□□□ -2
SPCS3P61009 SNORA31.13-201ENST00000516624 135 ntBASIC2.54□□□□□ -2
SPCS3P61009 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.54□□□□□ -2
SPCS3P61009 C1DP5-201ENST00000525775 383 ntBASIC2.54□□□□□ -2
SPCS3P61009 AP003385.6-201ENST00000531603 374 ntBASIC2.54□□□□□ -2
SPCS3P61009 OR5B10P-201ENST00000532869 642 ntBASIC2.54□□□□□ -2
SPCS3P61009 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.54□□□□□ -2
SPCS3P61009 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.54□□□□□ -2
SPCS3P61009 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.54□□□□□ -2
SPCS3P61009 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.54□□□□□ -2
SPCS3P61009 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.54□□□□□ -2
SPCS3P61009 MIR5186-201ENST00000577504 120 ntBASIC2.54□□□□□ -2
SPCS3P61009 MIR5194-201ENST00000582634 120 ntBASIC2.54□□□□□ -2
SPCS3P61009 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.54□□□□□ -2
SPCS3P61009 AL669831.4-202ENST00000590817 238 ntBASIC2.54□□□□□ -2
SPCS3P61009 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.54□□□□□ -2
SPCS3P61009 AL162274.2-201ENST00000614406 332 ntBASIC2.54□□□□□ -2
SPCS3P61009 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
SPCS3P61009 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.54□□□□□ -2
SPCS3P61009 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SPCS3P61009 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.54□□□□□ -2
SPCS3P61009 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SPCS3P61009 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.53□□□□□ -2
SPCS3P61009 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SPCS3P61009 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SPCS3P61009 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.53□□□□□ -2
SPCS3P61009 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.53□□□□□ -2
SPCS3P61009 AC234772.1-201ENST00000377927 937 ntBASIC2.53□□□□□ -2
SPCS3P61009 Y_RNA.493-201ENST00000384422 102 ntBASIC2.53□□□□□ -2
SPCS3P61009 MIR181B1-201ENST00000385240 110 ntBASIC2.53□□□□□ -2
SPCS3P61009 RPL31P1-201ENST00000398116 372 ntBASIC2.53□□□□□ -2
SPCS3P61009 RNU6ATAC-201ENST00000408749 126 ntBASIC2.53□□□□□ -2
SPCS3P61009 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.53□□□□□ -2
SPCS3P61009 AL645937.1-202ENST00000421799 937 ntBASIC2.53□□□□□ -2
SPCS3P61009 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.53□□□□□ -2
SPCS3P61009 AL445584.1-201ENST00000431451 330 ntBASIC2.53□□□□□ -2
SPCS3P61009 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.53□□□□□ -2
SPCS3P61009 AC129850.1-201ENST00000436203 508 ntBASIC2.53□□□□□ -2
SPCS3P61009 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.53□□□□□ -2
SPCS3P61009 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.53□□□□□ -2
SPCS3P61009 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.53□□□□□ -2
SPCS3P61009 H2AFZP6-201ENST00000444403 394 ntBASIC2.53□□□□□ -2
SPCS3P61009 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.53□□□□□ -2
SPCS3P61009 RPL23AP11-201ENST00000475260 469 ntBASIC2.53□□□□□ -2
SPCS3P61009 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.53□□□□□ -2
SPCS3P61009 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SPCS3P61009 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SPCS3P61009 AC008885.2-201ENST00000509506 930 ntBASIC2.53□□□□□ -2
SPCS3P61009 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.53□□□□□ -2
SPCS3P61009 HMGN1P15-201ENST00000513870 295 ntBASIC2.53□□□□□ -2
SPCS3P61009 RN7SKP40-201ENST00000517211 242 ntBASIC2.53□□□□□ -2
SPCS3P61009 AC010306.1-201ENST00000523223 1117 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms