Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH12P55289 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CDH12P55289 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH12P55289 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CDH12P55289 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.93□□□□□ -1.78
CDH12P55289 AC024589.1-201ENST00000512207 263 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AC034159.1-201ENST00000513885 583 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH12P55289 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH12P55289 AC022861.1-201ENST00000522981 663 ntBASIC3.93□□□□□ -1.78
CDH12P55289 OR5AP1P-201ENST00000529730 940 ntBASIC3.93□□□□□ -1.78
CDH12P55289 OR6C73P-201ENST00000546432 358 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.93□□□□□ -1.78
CDH12P55289 AC007599.1-201ENST00000568688 1174 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH12P55289 AC005771.1-201ENST00000585581 349 ntBASIC3.93□□□□□ -1.78
CDH12P55289 YWHAQP7-201ENST00000603536 658 ntBASIC3.93□□□□□ -1.78
CDH12P55289 AC080013.4-201ENST00000607624 649 ntBASIC3.93□□□□□ -1.78
CDH12P55289 Mico1.1-201ENST00000611698 204 ntBASIC3.93□□□□□ -1.78
CDH12P55289 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH12P55289 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH12P55289 CRYM-AS1-204ENST00000637983 556 ntBASIC3.93□□□□□ -1.78
CDH12P55289 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CDH12P55289 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH12P55289 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH12P55289 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH12P55289 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CDH12P55289 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH12P55289 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH12P55289 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.93□□□□□ -1.78
CDH12P55289 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CDH12P55289 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH12P55289 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CDH12P55289 AC074029.4-201ENST00000624796 1859 ntBASIC3.92□□□□□ -1.78
CDH12P55289 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH12P55289 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH12P55289 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CDH12P55289 RNU6-297P-201ENST00000384636 107 ntBASIC3.92□□□□□ -1.78
CDH12P55289 MIR1305-201ENST00000408300 86 ntBASIC3.92□□□□□ -1.78
CDH12P55289 RNU6-648P-201ENST00000410190 107 ntBASIC3.92□□□□□ -1.78
CDH12P55289 RN7SKP56-201ENST00000410513 331 ntBASIC3.92□□□□□ -1.78
CDH12P55289 RNU2-66P-201ENST00000410650 161 ntBASIC3.92□□□□□ -1.78
CDH12P55289 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH12P55289 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH12P55289 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.92□□□□□ -1.78
CDH12P55289 AL356387.2-201ENST00000422272 243 ntBASIC3.92□□□□□ -1.78
CDH12P55289 AL356583.2-201ENST00000426536 280 ntBASIC3.92□□□□□ -1.78
CDH12P55289 RPL23AP1-201ENST00000428990 471 ntBASIC3.92□□□□□ -1.78
CDH12P55289 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH12P55289 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.92□□□□□ -1.78
CDH12P55289 AC109583.1-201ENST00000432156 268 ntBASIC3.92□□□□□ -1.78
CDH12P55289 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH12P55289 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH12P55289 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH12P55289 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH12P55289 PAXBP1P1-201ENST00000449315 447 ntBASIC3.92□□□□□ -1.78
CDH12P55289 SUMO2P2-201ENST00000456482 255 ntBASIC3.92□□□□□ -1.78
CDH12P55289 RPL23AP72-201ENST00000492447 435 ntBASIC3.92□□□□□ -1.78
CDH12P55289 HMGB1P21-201ENST00000502313 581 ntBASIC3.92□□□□□ -1.78
CDH12P55289 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.92□□□□□ -1.78
CDH12P55289 AC096751.1-202ENST00000502691 1067 ntBASIC3.92□□□□□ -1.78
CDH12P55289 PRELID3BP7-201ENST00000503606 469 ntBASIC3.92□□□□□ -1.78
CDH12P55289 MTND2P33-201ENST00000506452 1031 ntBASIC3.92□□□□□ -1.78
CDH12P55289 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH12P55289 AC022447.3-201ENST00000506865 495 ntBASIC3.92□□□□□ -1.78
CDH12P55289 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH12P55289 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH12P55289 RN7SKP277-201ENST00000516895 283 ntBASIC3.92□□□□□ -1.78
CDH12P55289 IGLVIV-65-201ENST00000517313 360 ntBASIC3.92□□□□□ -1.78
CDH12P55289 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH12P55289 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.92□□□□□ -1.78
CDH12P55289 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH12P55289 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH12P55289 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH12P55289 RPL12P25-202ENST00000598100 674 ntBASIC3.92□□□□□ -1.78
CDH12P55289 SEPT7P9-203ENST00000604116 343 ntBASIC3.92□□□□□ -1.78
CDH12P55289 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH12P55289 AC087241.4-201ENST00000612441 480 ntBASIC3.92□□□□□ -1.78
CDH12P55289 AC138932.5-201ENST00000617759 563 ntBASIC3.92□□□□□ -1.78
CDH12P55289 uc_338.13-201ENST00000618243 179 ntBASIC3.92□□□□□ -1.78
CDH12P55289 MIR7703-201ENST00000620784 77 ntBASIC3.92□□□□□ -1.78
CDH12P55289 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH12P55289 AL356473.1-201ENST00000406203 1408 ntBASIC3.92□□□□□ -1.78
CDH12P55289 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH12P55289 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH12P55289 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH12P55289 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH12P55289 MAPK10-253ENST00000641010 4072 ntBASIC3.92□□□□□ -1.78
CDH12P55289 OR11H5P-202ENST00000641612 1325 ntBASIC3.92□□□□□ -1.78
CDH12P55289 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH12P55289 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
CDH12P55289 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CDH12P55289 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
CDH12P55289 Z82217.1-201ENST00000625157 8149 ntBASIC3.91□□□□□ -1.78
CDH12P55289 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH12P55289 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH12P55289 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CDH12P55289 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDH12P55289 RNU6-809P-201ENST00000384461 107 ntBASIC3.91□□□□□ -1.78
CDH12P55289 MIR129-1-201ENST00000384972 72 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms