Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
BRCA2P51587 AC107027.3-201ENST00000565095 3473 ntBASIC2.56□□□□□ -2
BRCA2P51587 Y_RNA.178-201ENST00000363832 102 ntBASIC2.56□□□□□ -2
BRCA2P51587 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.56□□□□□ -2
BRCA2P51587 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.56□□□□□ -2
BRCA2P51587 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.56□□□□□ -2
BRCA2P51587 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.56□□□□□ -2
BRCA2P51587 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.56□□□□□ -2
BRCA2P51587 AC004825.2-201ENST00000616634 455 ntBASIC2.56□□□□□ -2
BRCA2P51587 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
BRCA2P51587 AL353743.4-201ENST00000422653 1547 ntBASIC2.56□□□□□ -2
BRCA2P51587 DNAJC19P4-201ENST00000440115 345 ntBASIC2.56□□□□□ -2
BRCA2P51587 AL590399.6-201ENST00000446396 307 ntBASIC2.56□□□□□ -2
BRCA2P51587 RPL23AP45-201ENST00000476406 468 ntBASIC2.56□□□□□ -2
BRCA2P51587 AC126182.1-201ENST00000478134 357 ntBASIC2.56□□□□□ -2
BRCA2P51587 AC026412.2-201ENST00000512270 1075 ntBASIC2.56□□□□□ -2
BRCA2P51587 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC2.56□□□□□ -2
BRCA2P51587 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.56□□□□□ -2
BRCA2P51587 RPL23AP84-201ENST00000571193 464 ntBASIC2.56□□□□□ -2
BRCA2P51587 AC141257.3-201ENST00000572906 215 ntBASIC2.56□□□□□ -2
BRCA2P51587 AL365503.1-201ENST00000605247 905 ntBASIC2.56□□□□□ -2
BRCA2P51587 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.56□□□□□ -2
BRCA2P51587 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC2.56□□□□□ -2
BRCA2P51587 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.56□□□□□ -2
BRCA2P51587 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
BRCA2P51587 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
BRCA2P51587 AL451074.5-201ENST00000415894 435 ntBASIC2.55□□□□□ -2
BRCA2P51587 AC135721.1-201ENST00000497954 479 ntBASIC2.55□□□□□ -2
BRCA2P51587 AC005840.1-201ENST00000498412 377 ntBASIC2.55□□□□□ -2
BRCA2P51587 ELOCP31-201ENST00000540463 467 ntBASIC2.55□□□□□ -2
BRCA2P51587 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.55□□□□□ -2
BRCA2P51587 LUZP4P1-201ENST00000415420 344 ntBASIC2.55□□□□□ -2
BRCA2P51587 AC021269.2-201ENST00000532318 330 ntBASIC2.55□□□□□ -2
BRCA2P51587 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.55□□□□□ -2
BRCA2P51587 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
BRCA2P51587 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
BRCA2P51587 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
BRCA2P51587 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
BRCA2P51587 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC2.55□□□□□ -2
BRCA2P51587 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC2.55□□□□□ -2
BRCA2P51587 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.55□□□□□ -2
BRCA2P51587 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
BRCA2P51587 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
BRCA2P51587 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.55□□□□□ -2
BRCA2P51587 POLR2J4-204ENST00000418424 324 ntBASIC2.55□□□□□ -2
BRCA2P51587 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.55□□□□□ -2
BRCA2P51587 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.55□□□□□ -2
BRCA2P51587 RNA5SP490-201ENST00000517141 136 ntBASIC2.55□□□□□ -2
BRCA2P51587 SNRPGP18-201ENST00000553000 214 ntBASIC2.55□□□□□ -2
BRCA2P51587 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC2.55□□□□□ -2
BRCA2P51587 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.55□□□□□ -2
BRCA2P51587 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
BRCA2P51587 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.54□□□□□ -2
BRCA2P51587 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.54□□□□□ -2
BRCA2P51587 AC107398.1-201ENST00000486904 505 ntBASIC2.54□□□□□ -2
BRCA2P51587 CKS1BP7-201ENST00000522230 235 ntBASIC2.54□□□□□ -2
BRCA2P51587 SNORA4-201ENST00000584302 138 ntBASIC2.54□□□□□ -2
BRCA2P51587 AC103710.1-201ENST00000610003 901 ntBASIC2.54□□□□□ -2
BRCA2P51587 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC2.54□□□□□ -2
BRCA2P51587 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.54□□□□□ -2
BRCA2P51587 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.54□□□□□ -2
BRCA2P51587 RNY1P14-201ENST00000384426 108 ntBASIC2.54□□□□□ -2
BRCA2P51587 AL590004.2-201ENST00000404787 371 ntBASIC2.54□□□□□ -2
BRCA2P51587 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.54□□□□□ -2
BRCA2P51587 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.54□□□□□ -2
BRCA2P51587 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.54□□□□□ -2
BRCA2P51587 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.54□□□□□ -2
BRCA2P51587 RNU6-457P-201ENST00000363999 107 ntBASIC2.54□□□□□ -2
BRCA2P51587 DYNLL1P6-201ENST00000503440 264 ntBASIC2.54□□□□□ -2
BRCA2P51587 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.54□□□□□ -2
BRCA2P51587 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.54□□□□□ -2
BRCA2P51587 WISP1-OT1-201ENST00000602893 642 ntBASIC2.54□□□□□ -2
BRCA2P51587 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC2.53□□□□□ -2
BRCA2P51587 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.53□□□□□ -2
BRCA2P51587 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.53□□□□□ -2
BRCA2P51587 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
BRCA2P51587 EIF5P1-201ENST00000400019 1231 ntBASIC2.53□□□□□ -2
BRCA2P51587 FGF7P8-201ENST00000402994 292 ntBASIC2.53□□□□□ -2
BRCA2P51587 AC127526.1-201ENST00000417526 366 ntBASIC2.53□□□□□ -2
BRCA2P51587 AC013410.1-201ENST00000436223 1232 ntBASIC2.53□□□□□ -2
BRCA2P51587 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.53□□□□□ -2
BRCA2P51587 MTCYBP20-201ENST00000524239 1129 ntBASIC2.53□□□□□ -2
BRCA2P51587 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.53□□□□□ -2
BRCA2P51587 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
BRCA2P51587 MIR221-201ENST00000385135 110 ntBASIC2.53□□□□□ -2
BRCA2P51587 MIR137-201ENST00000385223 102 ntBASIC2.53□□□□□ -2
BRCA2P51587 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.53□□□□□ -2
BRCA2P51587 CR769767.1-201ENST00000436337 346 ntBASIC2.53□□□□□ -2
BRCA2P51587 AC103968.1-201ENST00000557841 573 ntBASIC2.53□□□□□ -2
BRCA2P51587 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2.01
BRCA2P51587 AC093278.1-201ENST00000494700 600 ntBASIC2.52□□□□□ -2.01
BRCA2P51587 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.52□□□□□ -2.01
BRCA2P51587 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
BRCA2P51587 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.52□□□□□ -2.01
BRCA2P51587 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.52□□□□□ -2.01
BRCA2P51587 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.52□□□□□ -2.01
BRCA2P51587 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC2.52□□□□□ -2.01
BRCA2P51587 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.52□□□□□ -2.01
BRCA2P51587 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
BRCA2P51587 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms