Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.57□□□□□ -2
SRP9P49458 RPS15AP40-201ENST00000419621 391 ntBASIC2.57□□□□□ -2
SRP9P49458 RPS24P8-201ENST00000431490 402 ntBASIC2.57□□□□□ -2
SRP9P49458 AL671855.1-201ENST00000446875 1203 ntBASIC2.57□□□□□ -2
SRP9P49458 AC112492.1-201ENST00000449607 712 ntBASIC2.57□□□□□ -2
SRP9P49458 HMGB1P5-202ENST00000451497 985 ntBASIC2.57□□□□□ -2
SRP9P49458 BX276092.4-201ENST00000452056 248 ntBASIC2.57□□□□□ -2
SRP9P49458 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.57□□□□□ -2
SRP9P49458 RPL23AP11-201ENST00000475260 469 ntBASIC2.57□□□□□ -2
SRP9P49458 MTND3P6-201ENST00000485242 339 ntBASIC2.57□□□□□ -2
SRP9P49458 DSTNP2-201ENST00000504533 515 ntBASIC2.57□□□□□ -2
SRP9P49458 AC008885.1-201ENST00000514930 301 ntBASIC2.57□□□□□ -2
SRP9P49458 SNORA31.1-201ENST00000515993 133 ntBASIC2.57□□□□□ -2
SRP9P49458 SNORA31.5-201ENST00000516190 133 ntBASIC2.57□□□□□ -2
SRP9P49458 AC009812.2-201ENST00000517657 457 ntBASIC2.57□□□□□ -2
SRP9P49458 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.57□□□□□ -2
SRP9P49458 AP003717.3-201ENST00000544832 1180 ntBASIC2.57□□□□□ -2
SRP9P49458 GTF2IP8-201ENST00000560687 584 ntBASIC2.57□□□□□ -2
SRP9P49458 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.57□□□□□ -2
SRP9P49458 AC006504.3-201ENST00000586818 523 ntBASIC2.57□□□□□ -2
SRP9P49458 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.57□□□□□ -2
SRP9P49458 AL162574.2-201ENST00000614618 657 ntBASIC2.57□□□□□ -2
SRP9P49458 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.57□□□□□ -2
SRP9P49458 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.57□□□□□ -2
SRP9P49458 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.57□□□□□ -2
SRP9P49458 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SRP9P49458 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SRP9P49458 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.56□□□□□ -2
SRP9P49458 AP003122.5-201ENST00000527668 3766 ntBASIC2.56□□□□□ -2
SRP9P49458 RNU1-140P-201ENST00000365040 165 ntBASIC2.56□□□□□ -2
SRP9P49458 SNORA11C-201ENST00000408532 129 ntBASIC2.56□□□□□ -2
SRP9P49458 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.56□□□□□ -2
SRP9P49458 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.56□□□□□ -2
SRP9P49458 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.56□□□□□ -2
SRP9P49458 AL592437.1-201ENST00000443781 492 ntBASIC2.56□□□□□ -2
SRP9P49458 ELOCP13-201ENST00000443934 329 ntBASIC2.56□□□□□ -2
SRP9P49458 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.56□□□□□ -2
SRP9P49458 HMGB1P15-201ENST00000453854 435 ntBASIC2.56□□□□□ -2
SRP9P49458 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.56□□□□□ -2
SRP9P49458 AC087879.1-201ENST00000474343 374 ntBASIC2.56□□□□□ -2
SRP9P49458 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.56□□□□□ -2
SRP9P49458 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SRP9P49458 AC009901.1-201ENST00000506703 541 ntBASIC2.56□□□□□ -2
SRP9P49458 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.56□□□□□ -2
SRP9P49458 RNU6-319P-201ENST00000516025 108 ntBASIC2.56□□□□□ -2
SRP9P49458 RNA5SP341-201ENST00000516261 117 ntBASIC2.56□□□□□ -2
SRP9P49458 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.56□□□□□ -2
SRP9P49458 AP000857.1-201ENST00000532151 543 ntBASIC2.56□□□□□ -2
SRP9P49458 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.56□□□□□ -2
SRP9P49458 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.56□□□□□ -2
SRP9P49458 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.56□□□□□ -2
SRP9P49458 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.56□□□□□ -2
SRP9P49458 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.56□□□□□ -2
SRP9P49458 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.56□□□□□ -2
SRP9P49458 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.56□□□□□ -2
SRP9P49458 MIR4325-201ENST00000583049 90 ntBASIC2.56□□□□□ -2
SRP9P49458 CYCSP41-201ENST00000616920 296 ntBASIC2.56□□□□□ -2
SRP9P49458 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.56□□□□□ -2
SRP9P49458 AC002064.3-201ENST00000623448 346 ntBASIC2.56□□□□□ -2
SRP9P49458 RPL23AP61-201ENST00000623642 466 ntBASIC2.56□□□□□ -2
SRP9P49458 AC079228.1-201ENST00000624774 1049 ntBASIC2.56□□□□□ -2
SRP9P49458 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.56□□□□□ -2
SRP9P49458 FAM157B-203ENST00000639350 358 ntBASIC2.56□□□□□ -2
SRP9P49458 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.56□□□□□ -2
SRP9P49458 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.56□□□□□ -2
SRP9P49458 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.55□□□□□ -2
SRP9P49458 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SRP9P49458 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.55□□□□□ -2
SRP9P49458 AL672167.1-206ENST00000356293 943 ntBASIC2.55□□□□□ -2
SRP9P49458 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.55□□□□□ -2
SRP9P49458 RNA5SP498-201ENST00000411342 120 ntBASIC2.55□□□□□ -2
SRP9P49458 YPEL5P1-201ENST00000419731 367 ntBASIC2.55□□□□□ -2
SRP9P49458 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.55□□□□□ -2
SRP9P49458 SNRPEP4-201ENST00000435815 279 ntBASIC2.55□□□□□ -2
SRP9P49458 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.55□□□□□ -2
SRP9P49458 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.55□□□□□ -2
SRP9P49458 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.55□□□□□ -2
SRP9P49458 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.55□□□□□ -2
SRP9P49458 RN7SL297P-201ENST00000483161 293 ntBASIC2.55□□□□□ -2
SRP9P49458 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.55□□□□□ -2
SRP9P49458 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.55□□□□□ -2
SRP9P49458 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.55□□□□□ -2
SRP9P49458 OSBPL9P3-201ENST00000534523 595 ntBASIC2.55□□□□□ -2
SRP9P49458 ELOCP31-201ENST00000540463 467 ntBASIC2.55□□□□□ -2
SRP9P49458 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.55□□□□□ -2
SRP9P49458 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.55□□□□□ -2
SRP9P49458 MTND4LP24-201ENST00000572277 291 ntBASIC2.55□□□□□ -2
SRP9P49458 AC125494.3-201ENST00000602759 455 ntBASIC2.55□□□□□ -2
SRP9P49458 AC019159.1-201ENST00000605094 187 ntBASIC2.55□□□□□ -2
SRP9P49458 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.55□□□□□ -2
SRP9P49458 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SRP9P49458 MIR6864-201ENST00000617935 70 ntBASIC2.55□□□□□ -2
SRP9P49458 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.55□□□□□ -2
SRP9P49458 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.55□□□□□ -2
SRP9P49458 FRG1DP-201ENST00000635586 771 ntBASIC2.55□□□□□ -2
SRP9P49458 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.55□□□□□ -2
SRP9P49458 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
SRP9P49458 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SRP9P49458 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.54□□□□□ -2
SRP9P49458 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms