Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 IGHV3-76-201ENST00000522465 295 ntBASIC3.12□□□□□ -1.91
RFX3P48380 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.12□□□□□ -1.91
RFX3P48380 AC037471.2-201ENST00000564941 598 ntBASIC3.12□□□□□ -1.91
RFX3P48380 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.12□□□□□ -1.91
RFX3P48380 AC012182.1-201ENST00000570133 895 ntBASIC3.12□□□□□ -1.91
RFX3P48380 AC074051.3-201ENST00000570238 358 ntBASIC3.12□□□□□ -1.91
RFX3P48380 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.12□□□□□ -1.91
RFX3P48380 AC133794.1-201ENST00000602731 914 ntBASIC3.12□□□□□ -1.91
RFX3P48380 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.12□□□□□ -1.91
RFX3P48380 AC011816.2-201ENST00000607089 556 ntBASIC3.12□□□□□ -1.91
RFX3P48380 AC092354.2-201ENST00000607786 514 ntBASIC3.12□□□□□ -1.91
RFX3P48380 AL513477.2-201ENST00000607858 568 ntBASIC3.12□□□□□ -1.91
RFX3P48380 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.12□□□□□ -1.91
RFX3P48380 AC107294.3-201ENST00000609211 526 ntBASIC3.12□□□□□ -1.91
RFX3P48380 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.12□□□□□ -1.91
RFX3P48380 CR381572.1-201ENST00000625098 102 ntBASIC3.12□□□□□ -1.91
RFX3P48380 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.12□□□□□ -1.91
RFX3P48380 AC127502.3-201ENST00000636170 1206 ntBASIC3.12□□□□□ -1.91
RFX3P48380 ZNF826P-207ENST00000622273 1910 ntBASIC3.12□□□□□ -1.91
RFX3P48380 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFX3P48380 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFX3P48380 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RFX3P48380 ZNF849P-201ENST00000594711 1566 ntBASIC3.12□□□□□ -1.91
RFX3P48380 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.12□□□□□ -1.91
RFX3P48380 AC007496.3-201ENST00000624987 3443 ntBASIC3.12□□□□□ -1.91
RFX3P48380 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFX3P48380 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFX3P48380 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RFX3P48380 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RFX3P48380 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RFX3P48380 Y_RNA.110-201ENST00000363220 99 ntBASIC3.11□□□□□ -1.91
RFX3P48380 SNORD46.1-201ENST00000364139 104 ntBASIC3.11□□□□□ -1.91
RFX3P48380 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFX3P48380 AC234772.1-201ENST00000377927 937 ntBASIC3.11□□□□□ -1.91
RFX3P48380 UBE2D3P3-201ENST00000426992 425 ntBASIC3.11□□□□□ -1.91
RFX3P48380 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX3P48380 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX3P48380 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.11□□□□□ -1.91
RFX3P48380 RABEPKP1-201ENST00000440529 1026 ntBASIC3.11□□□□□ -1.91
RFX3P48380 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.11□□□□□ -1.91
RFX3P48380 PTGES3P5-201ENST00000455109 434 ntBASIC3.11□□□□□ -1.91
RFX3P48380 HMGN1P18-201ENST00000457642 277 ntBASIC3.11□□□□□ -1.91
RFX3P48380 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX3P48380 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.11□□□□□ -1.91
RFX3P48380 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.11□□□□□ -1.91
RFX3P48380 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.11□□□□□ -1.91
RFX3P48380 AC114967.1-201ENST00000504890 259 ntBASIC3.11□□□□□ -1.91
RFX3P48380 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFX3P48380 AC112198.1-201ENST00000505369 1220 ntBASIC3.11□□□□□ -1.91
RFX3P48380 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX3P48380 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX3P48380 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX3P48380 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.11□□□□□ -1.91
RFX3P48380 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.11□□□□□ -1.91
RFX3P48380 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.11□□□□□ -1.91
RFX3P48380 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX3P48380 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX3P48380 MIR4276-201ENST00000584832 70 ntBASIC3.11□□□□□ -1.91
RFX3P48380 AP002906.1-201ENST00000603405 233 ntBASIC3.11□□□□□ -1.91
RFX3P48380 AC105227.2-201ENST00000615075 605 ntBASIC3.11□□□□□ -1.91
RFX3P48380 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.11□□□□□ -1.91
RFX3P48380 AC004777.1-201ENST00000624317 287 ntBASIC3.11□□□□□ -1.91
RFX3P48380 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.11□□□□□ -1.91
RFX3P48380 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.11□□□□□ -1.91
RFX3P48380 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.11□□□□□ -1.91
RFX3P48380 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RFX3P48380 MFSD8-233ENST00000641482 4860 ntBASIC3.11□□□□□ -1.91
RFX3P48380 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFX3P48380 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.11□□□□□ -1.91
RFX3P48380 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFX3P48380 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RFX3P48380 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.1□□□□□ -1.91
RFX3P48380 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RFX3P48380 SNORA63.1-201ENST00000362493 131 ntBASIC3.1□□□□□ -1.91
RFX3P48380 RNU6-1249P-201ENST00000363237 111 ntBASIC3.1□□□□□ -1.91
RFX3P48380 RNVU1-3-201ENST00000364313 161 ntBASIC3.1□□□□□ -1.91
RFX3P48380 MTND4LP20-201ENST00000402379 270 ntBASIC3.1□□□□□ -1.91
RFX3P48380 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFX3P48380 HMGB3P23-201ENST00000414981 585 ntBASIC3.1□□□□□ -1.91
RFX3P48380 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.1□□□□□ -1.91
RFX3P48380 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.1□□□□□ -1.91
RFX3P48380 AC246680.2-201ENST00000422106 389 ntBASIC3.1□□□□□ -1.91
RFX3P48380 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.1□□□□□ -1.91
RFX3P48380 YME1L1P1-201ENST00000429435 297 ntBASIC3.1□□□□□ -1.91
RFX3P48380 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.1□□□□□ -1.91
RFX3P48380 RPL7P59-201ENST00000447700 943 ntBASIC3.1□□□□□ -1.91
RFX3P48380 AL034418.1-201ENST00000448675 860 ntBASIC3.1□□□□□ -1.91
RFX3P48380 AC104308.1-201ENST00000454621 333 ntBASIC3.1□□□□□ -1.91
RFX3P48380 NAP1L1P3-201ENST00000462291 880 ntBASIC3.1□□□□□ -1.91
RFX3P48380 RPL21P104-201ENST00000464143 478 ntBASIC3.1□□□□□ -1.91
RFX3P48380 RN7SL293P-201ENST00000481765 281 ntBASIC3.1□□□□□ -1.91
RFX3P48380 RPL7P38-201ENST00000488396 739 ntBASIC3.1□□□□□ -1.91
RFX3P48380 KCTD9P5-201ENST00000504141 1170 ntBASIC3.1□□□□□ -1.91
RFX3P48380 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.1□□□□□ -1.91
RFX3P48380 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFX3P48380 AC004062.1-201ENST00000509926 645 ntBASIC3.1□□□□□ -1.91
RFX3P48380 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.1□□□□□ -1.91
RFX3P48380 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.1□□□□□ -1.91
RFX3P48380 AP000790.1-201ENST00000528891 737 ntBASIC3.1□□□□□ -1.91
RFX3P48380 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms