Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNU6-839P-201ENST00000363347 108 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 RNU1-85P-201ENST00000364127 164 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCLP35914 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HMGCLP35914 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCLP35914 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HMGCLP35914 RNU6-224P-201ENST00000384055 107 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 RNU6-1293P-201ENST00000384077 107 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 Y_RNA.472-201ENST00000384322 102 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HMGCLP35914 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGCLP35914 BX842559.1-201ENST00000419615 532 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 RPS15AP6-201ENST00000420703 385 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 RPL31P12-201ENST00000422587 358 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGCLP35914 NANOGP2-201ENST00000435391 727 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGCLP35914 AL589880.1-201ENST00000448271 287 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 ZNF886P-201ENST00000450781 723 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 RPL12P26-201ENST00000452430 487 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 NPM1P13-201ENST00000452663 865 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGCLP35914 RPS4XP2-201ENST00000458402 793 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 SNORD11.1-201ENST00000459482 85 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 RPL23AP44-201ENST00000482216 473 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCLP35914 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCLP35914 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGCLP35914 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCLP35914 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGCLP35914 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGCLP35914 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGCLP35914 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGCLP35914 ARL2BPP6-201ENST00000512757 439 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 PHBP14-201ENST00000512887 367 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGCLP35914 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCLP35914 IGKV2-26-201ENST00000518305 343 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGCLP35914 TGIF1P1-201ENST00000558095 802 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGCLP35914 AL845331.3-202ENST00000562856 261 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 AC069304.3-201ENST00000603938 1084 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 AC023158.2-201ENST00000614876 543 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.42□□□□□ -1.86
HMGCLP35914 RNU6-156P-201ENST00000621869 107 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGCLP35914 AP001002.2-201ENST00000625137 386 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGCLP35914 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.42□□□□□ -1.86
HMGCLP35914 LINC02211-204ENST00000642024 1070 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.42□□□□□ -1.86
HMGCLP35914 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCLP35914 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HMGCLP35914 AC011978.2-201ENST00000569835 2054 ntBASIC3.42□□□□□ -1.86
HMGCLP35914 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
HMGCLP35914 DBF4P1-201ENST00000412976 1892 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGCLP35914 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGCLP35914 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
HMGCLP35914 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCLP35914 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGCLP35914 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCLP35914 SNORD116-23-201ENST00000384645 92 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 AL139098.1-201ENST00000407291 389 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 RN7SKP27-201ENST00000410684 333 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 AC245052.5-201ENST00000416320 649 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 AL356320.2-201ENST00000417263 507 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 AC008280.1-201ENST00000418851 412 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGCLP35914 AL513175.2-201ENST00000422071 443 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGCLP35914 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.41□□□□□ -1.86
HMGCLP35914 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGCLP35914 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGCLP35914 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGCLP35914 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGCLP35914 SLC31A1P1-201ENST00000451221 567 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 AC097262.1-201ENST00000452559 548 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGCLP35914 RN7SL293P-201ENST00000481765 281 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCLP35914 AC114322.1-201ENST00000506771 926 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 AC090071.1-201ENST00000507713 644 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCLP35914 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGCLP35914 PTGES3P3-201ENST00000511479 482 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 RNU6-488P-201ENST00000515918 99 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 RN7SKP96-201ENST00000516948 297 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGCLP35914 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGCLP35914 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGCLP35914 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGCLP35914 AC044913.1-201ENST00000557200 430 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 MTCYBP23-201ENST00000558717 1102 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGCLP35914 MIR5186-201ENST00000577504 120 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 MIR4425-201ENST00000580572 84 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms