Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RPL23AP33-201ENST00000442301 452 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.22□□□□□ -1.89
SHMT2P34897 AL590399.6-201ENST00000446396 307 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.22□□□□□ -1.89
SHMT2P34897 NF1P3-201ENST00000457709 450 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.22□□□□□ -1.89
SHMT2P34897 AC104629.1-201ENST00000494226 508 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 AC091860.1-201ENST00000505723 432 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.22□□□□□ -1.89
SHMT2P34897 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.22□□□□□ -1.89
SHMT2P34897 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.22□□□□□ -1.89
SHMT2P34897 AC104115.2-201ENST00000523026 687 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 AP003066.2-201ENST00000529375 555 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.22□□□□□ -1.89
SHMT2P34897 AC005476.1-201ENST00000554427 397 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.22□□□□□ -1.89
SHMT2P34897 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.22□□□□□ -1.89
SHMT2P34897 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.22□□□□□ -1.89
SHMT2P34897 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.22□□□□□ -1.89
SHMT2P34897 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.22□□□□□ -1.89
SHMT2P34897 AL162713.1-201ENST00000604480 262 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 AC002487.1-201ENST00000604565 994 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.22□□□□□ -1.89
SHMT2P34897 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.22□□□□□ -1.89
SHMT2P34897 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 AC022079.2-201ENST00000619739 566 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.22□□□□□ -1.89
SHMT2P34897 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.22□□□□□ -1.89
SHMT2P34897 AC118273.1-201ENST00000525324 3006 ntBASIC3.22□□□□□ -1.89
SHMT2P34897 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.22□□□□□ -1.89
SHMT2P34897 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
SHMT2P34897 MTND5P3-201ENST00000438536 1800 ntBASIC3.21□□□□□ -1.89
SHMT2P34897 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SHMT2P34897 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.21□□□□□ -1.9
SHMT2P34897 MAPK10-362ENST00000641864 4484 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHMT2P34897 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHMT2P34897 MTCO2P31-201ENST00000402702 684 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SHMT2P34897 HMGN1P24-201ENST00000412282 298 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.21□□□□□ -1.9
SHMT2P34897 RPL31P2-201ENST00000413849 377 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHMT2P34897 AC027644.1-201ENST00000419595 298 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.21□□□□□ -1.9
SHMT2P34897 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.21□□□□□ -1.9
SHMT2P34897 FTH1P1-201ENST00000437933 532 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.21□□□□□ -1.9
SHMT2P34897 HMGN2P21-201ENST00000447764 270 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 RPS4XP10-201ENST00000465034 731 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AC091153.1-201ENST00000466297 402 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.21□□□□□ -1.9
SHMT2P34897 RPL7P38-201ENST00000488396 739 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AC026414.1-201ENST00000504046 698 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AC016550.1-201ENST00000505348 785 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 HSPD1P15-201ENST00000505573 1122 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.21□□□□□ -1.9
SHMT2P34897 AC119751.1-201ENST00000513357 765 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 SCARNA20.6-201ENST00000517251 106 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.21□□□□□ -1.9
SHMT2P34897 AC068339.2-201ENST00000534395 618 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.21□□□□□ -1.9
SHMT2P34897 UBE2NP1-201ENST00000545592 458 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.21□□□□□ -1.9
SHMT2P34897 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.21□□□□□ -1.9
SHMT2P34897 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.21□□□□□ -1.9
SHMT2P34897 AC023825.1-201ENST00000566704 1030 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.21□□□□□ -1.9
SHMT2P34897 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.21□□□□□ -1.9
SHMT2P34897 AC090079.2-201ENST00000575289 768 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AC022069.1-201ENST00000582910 658 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 HSPE1P14-201ENST00000605812 302 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AC112503.1-201ENST00000608436 391 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AL157817.1-201ENST00000614264 790 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.21□□□□□ -1.9
SHMT2P34897 AC006927.2-201ENST00000639256 389 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 AC139713.2-210ENST00000641741 992 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHMT2P34897 MTND5P31-201ENST00000419366 1374 ntBASIC3.21□□□□□ -1.9
SHMT2P34897 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHMT2P34897 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.21□□□□□ -1.9
SHMT2P34897 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHMT2P34897 AC021755.1-201ENST00000559747 1447 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SHMT2P34897 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SHMT2P34897 RPL7P26-201ENST00000333817 754 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 MCTS2P-201ENST00000394552 546 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 AL355379.1-201ENST00000405542 640 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 AC073264.1-201ENST00000411508 416 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.2□□□□□ -1.9
SHMT2P34897 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.2□□□□□ -1.9
SHMT2P34897 SFR1P2-201ENST00000421841 730 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 AC013262.1-201ENST00000426710 252 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.2□□□□□ -1.9
SHMT2P34897 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.2□□□□□ -1.9
SHMT2P34897 ISCA1P2-201ENST00000438679 421 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 AL591503.2-201ENST00000442314 1005 ntBASIC3.2□□□□□ -1.9
SHMT2P34897 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
SHMT2P34897 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.2□□□□□ -1.9
SHMT2P34897 AL049829.1-201ENST00000465411 156 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 468.4 ms