Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.31□□□□□ -1.88
CASQ1P31415 LINC00216-201ENST00000623548 1126 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 AL109659.3-201ENST00000624985 950 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.31□□□□□ -1.88
CASQ1P31415 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.31□□□□□ -1.88
CASQ1P31415 AC006378.2-201ENST00000623178 2476 ntBASIC3.3□□□□□ -1.88
CASQ1P31415 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CASQ1P31415 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CASQ1P31415 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CASQ1P31415 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.3□□□□□ -1.88
CASQ1P31415 RNU6-1180P-201ENST00000364935 107 ntBASIC3.3□□□□□ -1.88
CASQ1P31415 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.3□□□□□ -1.88
CASQ1P31415 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CASQ1P31415 RNU6-272P-201ENST00000411028 104 ntBASIC3.3□□□□□ -1.88
CASQ1P31415 AL512504.1-201ENST00000415494 778 ntBASIC3.3□□□□□ -1.88
CASQ1P31415 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.3□□□□□ -1.88
CASQ1P31415 BX842559.1-201ENST00000419615 532 ntBASIC3.3□□□□□ -1.88
CASQ1P31415 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.3□□□□□ -1.88
CASQ1P31415 RPL7P2-201ENST00000427639 268 ntBASIC3.3□□□□□ -1.88
CASQ1P31415 LSM1P1-201ENST00000438629 273 ntBASIC3.3□□□□□ -1.88
CASQ1P31415 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.3□□□□□ -1.88
CASQ1P31415 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.3□□□□□ -1.88
CASQ1P31415 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.3□□□□□ -1.88
CASQ1P31415 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.3□□□□□ -1.88
CASQ1P31415 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.3□□□□□ -1.88
CASQ1P31415 AC026979.1-201ENST00000492525 396 ntBASIC3.3□□□□□ -1.88
CASQ1P31415 AC021678.1-201ENST00000505195 936 ntBASIC3.3□□□□□ -1.88
CASQ1P31415 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.3□□□□□ -1.88
CASQ1P31415 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.3□□□□□ -1.88
CASQ1P31415 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.3□□□□□ -1.88
CASQ1P31415 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.3□□□□□ -1.88
CASQ1P31415 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.3□□□□□ -1.88
CASQ1P31415 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.3□□□□□ -1.88
CASQ1P31415 ZYXP1-201ENST00000617638 118 ntBASIC3.3□□□□□ -1.88
CASQ1P31415 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.3□□□□□ -1.88
CASQ1P31415 AL161637.1-201ENST00000622380 412 ntBASIC3.3□□□□□ -1.88
CASQ1P31415 AC017104.5-201ENST00000637647 639 ntBASIC3.3□□□□□ -1.88
CASQ1P31415 AC244517.1-201ENST00000606030 2086 ntBASIC3.3□□□□□ -1.88
CASQ1P31415 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CASQ1P31415 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.3□□□□□ -1.88
CASQ1P31415 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.29□□□□□ -1.88
CASQ1P31415 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CASQ1P31415 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CASQ1P31415 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
CASQ1P31415 OR1S2-201ENST00000302592 978 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 AL672167.1-206ENST00000356293 943 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 AL359837.1-201ENST00000381357 287 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.29□□□□□ -1.88
CASQ1P31415 FABP12P1-201ENST00000401911 322 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 HMGN1P24-201ENST00000412282 298 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.29□□□□□ -1.88
CASQ1P31415 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 AC016712.1-201ENST00000431088 378 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 AL590762.3-201ENST00000436372 640 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.29□□□□□ -1.88
CASQ1P31415 MUPP-201ENST00000438111 566 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 ELOCP23-201ENST00000452014 332 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 AC034236.1-201ENST00000469891 373 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 AIG1P1-201ENST00000503376 148 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 AC104619.4-201ENST00000510773 249 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 RAC1P5-201ENST00000512182 576 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 NPM1P41-201ENST00000512920 831 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.29□□□□□ -1.88
CASQ1P31415 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.29□□□□□ -1.88
CASQ1P31415 RNU6-202P-201ENST00000515998 96 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.29□□□□□ -1.88
CASQ1P31415 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CASQ1P31415 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CASQ1P31415 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.29□□□□□ -1.88
CASQ1P31415 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.29□□□□□ -1.88
CASQ1P31415 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.29□□□□□ -1.88
CASQ1P31415 U73023.1-201ENST00000603134 700 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 AC004775.1-201ENST00000607389 753 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CASQ1P31415 AC006338.2-201ENST00000616864 791 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.29□□□□□ -1.88
CASQ1P31415 MIR6730-201ENST00000622213 67 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 MTND2P41-201ENST00000637599 773 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CASQ1P31415 AC026241.1-201ENST00000517873 2142 ntBASIC3.29□□□□□ -1.88
CASQ1P31415 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CASQ1P31415 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.29□□□□□ -1.88
CASQ1P31415 AC126755.2-208ENST00000327792 462 ntBASIC3.28□□□□□ -1.88
CASQ1P31415 AC138969.1-213ENST00000331436 462 ntBASIC3.28□□□□□ -1.88
CASQ1P31415 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.28□□□□□ -1.88
CASQ1P31415 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CASQ1P31415 RNU6-821P-201ENST00000390995 107 ntBASIC3.28□□□□□ -1.88
CASQ1P31415 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.28□□□□□ -1.88
CASQ1P31415 AL451074.5-201ENST00000415894 435 ntBASIC3.28□□□□□ -1.88
CASQ1P31415 TMEM167AP1-201ENST00000423409 219 ntBASIC3.28□□□□□ -1.88
CASQ1P31415 AC096632.1-201ENST00000427395 310 ntBASIC3.28□□□□□ -1.88
CASQ1P31415 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CASQ1P31415 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.28□□□□□ -1.88
CASQ1P31415 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.28□□□□□ -1.88
CASQ1P31415 RPL21P10-201ENST00000463521 490 ntBASIC3.28□□□□□ -1.88
CASQ1P31415 SETP11-201ENST00000473027 690 ntBASIC3.28□□□□□ -1.88
CASQ1P31415 RPS27AP9-201ENST00000477681 438 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms