Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.67□□□□□ -1.66
POLR2AP24928 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.67□□□□□ -1.66
POLR2AP24928 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.67□□□□□ -1.66
POLR2AP24928 AC090616.5-202ENST00000582111 297 ntBASIC4.67□□□□□ -1.66
POLR2AP24928 AC010133.1-201ENST00000615809 842 ntBASIC4.67□□□□□ -1.66
POLR2AP24928 AL355365.1-201ENST00000616480 294 ntBASIC4.67□□□□□ -1.66
POLR2AP24928 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
POLR2AP24928 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
POLR2AP24928 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
POLR2AP24928 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
POLR2AP24928 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
POLR2AP24928 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
POLR2AP24928 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
POLR2AP24928 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
POLR2AP24928 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
POLR2AP24928 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
POLR2AP24928 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
POLR2AP24928 CBX3P1-201ENST00000325243 554 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 RNU4-73P-201ENST00000363164 141 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 Y_RNA.256-201ENST00000364594 104 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.66□□□□□ -1.66
POLR2AP24928 RPS7P15-201ENST00000415804 584 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 NUP35P2-201ENST00000416748 943 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 Z97055.1-201ENST00000419730 712 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 AL356583.2-201ENST00000426536 280 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
POLR2AP24928 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.66□□□□□ -1.66
POLR2AP24928 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.66□□□□□ -1.66
POLR2AP24928 RPL7P36-201ENST00000444633 681 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.66□□□□□ -1.66
POLR2AP24928 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.66□□□□□ -1.66
POLR2AP24928 FABP3P2-201ENST00000453169 399 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 RPL23AP12-201ENST00000467573 473 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.66□□□□□ -1.66
POLR2AP24928 AC069439.1-201ENST00000494739 167 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.66□□□□□ -1.66
POLR2AP24928 AC108941.1-201ENST00000502853 530 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.66□□□□□ -1.66
POLR2AP24928 AC011352.3-201ENST00000505162 593 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.66□□□□□ -1.66
POLR2AP24928 ARL2BPP6-201ENST00000512757 439 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.66□□□□□ -1.66
POLR2AP24928 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.66□□□□□ -1.66
POLR2AP24928 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.66□□□□□ -1.66
POLR2AP24928 MIR4637-201ENST00000582405 84 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.66□□□□□ -1.66
POLR2AP24928 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.66□□□□□ -1.66
POLR2AP24928 AL121890.2-201ENST00000617644 465 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 AC126177.8-201ENST00000618339 1015 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
POLR2AP24928 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
POLR2AP24928 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
POLR2AP24928 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.66□□□□□ -1.66
POLR2AP24928 MTND5P23-201ENST00000430812 1655 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.66□□□□□ -1.66
POLR2AP24928 MTND5P1-201ENST00000445440 1375 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 MTND4P16-201ENST00000466108 1367 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 AC107021.2-201ENST00000567714 2095 ntBASIC4.66□□□□□ -1.66
POLR2AP24928 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
POLR2AP24928 Y_RNA.296-201ENST00000364930 108 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 RNU4-12P-201ENST00000365233 139 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 RNU6-1103P-201ENST00000384150 107 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
POLR2AP24928 RN7SKP177-201ENST00000410567 355 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.65□□□□□ -1.66
POLR2AP24928 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.65□□□□□ -1.66
POLR2AP24928 AL365184.2-201ENST00000431139 435 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 AC093716.1-201ENST00000435923 377 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 AL662791.1-201ENST00000441992 928 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 AL591473.1-201ENST00000464297 313 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 SNRPCP3-201ENST00000474888 476 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 HMGB1P36-201ENST00000487709 576 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.65□□□□□ -1.66
POLR2AP24928 HMGN1P12-201ENST00000499125 195 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.65□□□□□ -1.66
POLR2AP24928 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
POLR2AP24928 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.65□□□□□ -1.66
POLR2AP24928 RNU6-507P-201ENST00000516045 100 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 DEFB131D-201ENST00000526803 184 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 SLC2A13P1-201ENST00000531560 322 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 OR5B10P-201ENST00000532869 642 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 CYCSP30-201ENST00000546447 172 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 AC123904.3-201ENST00000547218 814 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 HIGD1AP17-201ENST00000554576 276 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.65□□□□□ -1.66
POLR2AP24928 GNRHR2P1-201ENST00000555315 631 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.65□□□□□ -1.66
POLR2AP24928 AC138915.2-201ENST00000569776 97 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 MIR5187-201ENST00000583479 76 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 AL589743.7-201ENST00000612637 233 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 MKKS-204ENST00000639674 192 ntBASIC4.65□□□□□ -1.66
POLR2AP24928 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
POLR2AP24928 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
POLR2AP24928 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
POLR2AP24928 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
POLR2AP24928 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
POLR2AP24928 AP004289.2-201ENST00000444413 1457 ntBASIC4.65□□□□□ -1.67
POLR2AP24928 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
POLR2AP24928 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms