Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC004825.2-201ENST00000616634 455 ntBASIC4.06□□□□□ -1.76
TOP2AP11388 AP001005.3-201ENST00000622049 129 ntBASIC4.06□□□□□ -1.76
TOP2AP11388 AC110994.2-201ENST00000635481 492 ntBASIC4.06□□□□□ -1.76
TOP2AP11388 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TOP2AP11388 RNU6-253P-201ENST00000384730 105 ntBASIC4.05□□□□□ -1.76
TOP2AP11388 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TOP2AP11388 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.05□□□□□ -1.76
TOP2AP11388 MTCYBP19-201ENST00000517463 1124 ntBASIC4.05□□□□□ -1.76
TOP2AP11388 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.05□□□□□ -1.76
TOP2AP11388 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.05□□□□□ -1.76
TOP2AP11388 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TOP2AP11388 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
TOP2AP11388 AC009501.3-201ENST00000605001 1352 ntBASIC4.05□□□□□ -1.76
TOP2AP11388 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.05□□□□□ -1.76
TOP2AP11388 RPL21P18-201ENST00000469899 480 ntBASIC4.05□□□□□ -1.76
TOP2AP11388 PDCL2P2-201ENST00000533651 189 ntBASIC4.05□□□□□ -1.76
TOP2AP11388 PDCD5P1-201ENST00000543528 309 ntBASIC4.05□□□□□ -1.76
TOP2AP11388 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOP2AP11388 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TOP2AP11388 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TOP2AP11388 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TOP2AP11388 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
TOP2AP11388 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TOP2AP11388 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TOP2AP11388 GSTA9P-201ENST00000406231 611 ntBASIC4.04□□□□□ -1.76
TOP2AP11388 SNORD88.1-201ENST00000408684 91 ntBASIC4.04□□□□□ -1.76
TOP2AP11388 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.04□□□□□ -1.76
TOP2AP11388 EIF2S2P4-201ENST00000461070 984 ntBASIC4.04□□□□□ -1.76
TOP2AP11388 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
TOP2AP11388 NIPA2P2-201ENST00000496376 1083 ntBASIC4.04□□□□□ -1.76
TOP2AP11388 AC107222.1-201ENST00000510899 637 ntBASIC4.04□□□□□ -1.76
TOP2AP11388 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TOP2AP11388 MTCYBP20-201ENST00000524239 1129 ntBASIC4.04□□□□□ -1.76
TOP2AP11388 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.04□□□□□ -1.76
TOP2AP11388 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.04□□□□□ -1.76
TOP2AP11388 AC103710.3-201ENST00000608157 948 ntBASIC4.04□□□□□ -1.76
TOP2AP11388 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
TOP2AP11388 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
TOP2AP11388 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TOP2AP11388 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TOP2AP11388 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TOP2AP11388 AL159169.1-201ENST00000421119 127 ntBASIC4.03□□□□□ -1.76
TOP2AP11388 PTP4A1P7-201ENST00000423476 514 ntBASIC4.03□□□□□ -1.76
TOP2AP11388 RPS6P12-201ENST00000432491 726 ntBASIC4.03□□□□□ -1.76
TOP2AP11388 HMGB1P15-201ENST00000453854 435 ntBASIC4.03□□□□□ -1.76
TOP2AP11388 HMGN2P23-201ENST00000456759 269 ntBASIC4.03□□□□□ -1.76
TOP2AP11388 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TOP2AP11388 AC074029.1-201ENST00000552531 1044 ntBASIC4.03□□□□□ -1.76
TOP2AP11388 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.03□□□□□ -1.76
TOP2AP11388 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.03□□□□□ -1.76
TOP2AP11388 MIR6873-201ENST00000622788 63 ntBASIC4.03□□□□□ -1.76
TOP2AP11388 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.77
TOP2AP11388 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.02□□□□□ -1.77
TOP2AP11388 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.02□□□□□ -1.77
TOP2AP11388 AC010881.1-201ENST00000433830 235 ntBASIC4.02□□□□□ -1.77
TOP2AP11388 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.02□□□□□ -1.77
TOP2AP11388 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TOP2AP11388 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.02□□□□□ -1.77
TOP2AP11388 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.02□□□□□ -1.77
TOP2AP11388 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.02□□□□□ -1.77
TOP2AP11388 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TOP2AP11388 AL023284.1-201ENST00000403956 276 ntBASIC4.01□□□□□ -1.77
TOP2AP11388 AC092427.1-202ENST00000430569 476 ntBASIC4.01□□□□□ -1.77
TOP2AP11388 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.01□□□□□ -1.77
TOP2AP11388 AC015712.3-201ENST00000559380 164 ntBASIC4.01□□□□□ -1.77
TOP2AP11388 AL109741.3-201ENST00000561748 592 ntBASIC4.01□□□□□ -1.77
TOP2AP11388 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TOP2AP11388 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.01□□□□□ -1.77
TOP2AP11388 AC016590.3-201ENST00000611171 753 ntBASIC4.01□□□□□ -1.77
TOP2AP11388 CR589904.2-201ENST00000612533 440 ntBASIC4.01□□□□□ -1.77
TOP2AP11388 AC074140.1-201ENST00000621617 208 ntBASIC4.01□□□□□ -1.77
TOP2AP11388 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TOP2AP11388 ZNF72P-201ENST00000425869 1908 ntBASIC4.01□□□□□ -1.77
TOP2AP11388 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TOP2AP11388 SNORA51.4-201ENST00000364993 124 ntBASIC4□□□□□ -1.77
TOP2AP11388 XKRY-201ENST00000510392 1100 ntBASIC4□□□□□ -1.77
TOP2AP11388 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4□□□□□ -1.77
TOP2AP11388 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4□□□□□ -1.77
TOP2AP11388 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4□□□□□ -1.77
TOP2AP11388 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4□□□□□ -1.77
TOP2AP11388 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4□□□□□ -1.77
TOP2AP11388 MIR142-201ENST00000384835 87 ntBASIC4□□□□□ -1.77
TOP2AP11388 GSTA12P-201ENST00000402398 508 ntBASIC4□□□□□ -1.77
TOP2AP11388 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4□□□□□ -1.77
TOP2AP11388 TRBV1-201ENST00000476502 284 ntBASIC4□□□□□ -1.77
TOP2AP11388 RN7SL283P-201ENST00000489055 303 ntBASIC4□□□□□ -1.77
TOP2AP11388 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4□□□□□ -1.77
TOP2AP11388 USP9YP5-201ENST00000511770 630 ntBASIC4□□□□□ -1.77
TOP2AP11388 RN7SKP244-201ENST00000516513 307 ntBASIC4□□□□□ -1.77
TOP2AP11388 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4□□□□□ -1.77
TOP2AP11388 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.99□□□□□ -1.77
TOP2AP11388 RPS15AP28-201ENST00000435088 386 ntBASIC3.99□□□□□ -1.77
TOP2AP11388 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.99□□□□□ -1.77
TOP2AP11388 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.99□□□□□ -1.77
TOP2AP11388 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.99□□□□□ -1.77
TOP2AP11388 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.99□□□□□ -1.77
TOP2AP11388 AC117529.2-201ENST00000512159 2068 ntBASIC3.99□□□□□ -1.77
TOP2AP11388 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.98□□□□□ -1.77
TOP2AP11388 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
TOP2AP11388 RNA5SP88-201ENST00000365560 109 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms