Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.19□□□□□ -2.06
CXCL1P09341 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CXCL1P09341 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.19□□□□□ -2.06
CXCL1P09341 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.19□□□□□ -2.06
CXCL1P09341 UBE2V1P1-201ENST00000430836 445 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 RPL23AP58-201ENST00000440453 469 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.19□□□□□ -2.06
CXCL1P09341 MTCO3P17-201ENST00000443775 513 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.19□□□□□ -2.06
CXCL1P09341 AL034418.1-201ENST00000448675 860 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 RAB9AP1-201ENST00000449393 573 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 AC009220.1-201ENST00000451614 275 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 AL109741.2-201ENST00000455561 343 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 RN7SL863P-201ENST00000462370 296 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 HMGN1P8-201ENST00000463578 288 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CXCL1P09341 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 AIG1P1-201ENST00000503376 148 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.19□□□□□ -2.06
CXCL1P09341 SNORA31.11-201ENST00000516528 139 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 SNORA31.20-201ENST00000517111 133 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.19□□□□□ -2.06
CXCL1P09341 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.19□□□□□ -2.06
CXCL1P09341 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CXCL1P09341 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.19□□□□□ -2.06
CXCL1P09341 DNAJC8P1-201ENST00000554535 372 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.19□□□□□ -2.06
CXCL1P09341 NCAPGP2-201ENST00000557911 754 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 AC107954.1-201ENST00000565906 727 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 AC115989.2-201ENST00000578640 563 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 AC060766.3-201ENST00000591442 263 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.19□□□□□ -2.06
CXCL1P09341 AC009220.3-201ENST00000604318 586 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.19□□□□□ -2.06
CXCL1P09341 NF1P10-201ENST00000613227 742 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 AC091953.5-201ENST00000622919 233 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CXCL1P09341 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CXCL1P09341 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.19□□□□□ -2.06
CXCL1P09341 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CXCL1P09341 MTND5P28-201ENST00000438005 1594 ntBASIC2.19□□□□□ -2.06
CXCL1P09341 RNA5SP124-201ENST00000362739 110 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 SNORA9.2-201ENST00000365361 133 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 RNU1-138P-201ENST00000384093 164 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 AL512633.1-201ENST00000399931 655 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC2.18□□□□□ -2.06
CXCL1P09341 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 PRRC2CP1-201ENST00000404428 159 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 CYCSP19-201ENST00000411715 316 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL1P09341 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL1P09341 RPS29P4-201ENST00000414733 161 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 AC063979.1-201ENST00000415539 377 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.18□□□□□ -2.06
CXCL1P09341 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL1P09341 AC011242.1-201ENST00000433596 1158 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.18□□□□□ -2.06
CXCL1P09341 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CXCL1P09341 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL1P09341 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL1P09341 AL162389.1-201ENST00000449233 177 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 HMGB1P5-202ENST00000451497 985 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL1P09341 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL1P09341 AC003982.1-202ENST00000469928 248 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL1P09341 AC107398.1-201ENST00000486904 505 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 RN7SKP96-201ENST00000516948 297 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL1P09341 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.18□□□□□ -2.06
CXCL1P09341 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL1P09341 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.18□□□□□ -2.06
CXCL1P09341 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.18□□□□□ -2.06
CXCL1P09341 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.18□□□□□ -2.06
CXCL1P09341 OR7K1P-201ENST00000546439 926 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 AC011611.1-201ENST00000552179 197 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL1P09341 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL1P09341 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.18□□□□□ -2.06
CXCL1P09341 MIR4700-201ENST00000578311 74 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL1P09341 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL1P09341 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.18□□□□□ -2.06
CXCL1P09341 RPL23AP78-201ENST00000599928 470 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 NTAN1P1-201ENST00000603150 646 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 MIR378J-201ENST00000611988 109 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 SNHG22-203ENST00000617833 660 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.18□□□□□ -2.06
CXCL1P09341 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.18□□□□□ -2.06
CXCL1P09341 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.18□□□□□ -2.06
CXCL1P09341 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.18□□□□□ -2.06
CXCL1P09341 AC139713.2-210ENST00000641741 992 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CXCL1P09341 AC096644.4-201ENST00000563417 2912 ntBASIC2.18□□□□□ -2.06
CXCL1P09341 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CXCL1P09341 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CXCL1P09341 RNU6-1243P-201ENST00000364028 107 ntBASIC2.17□□□□□ -2.06
CXCL1P09341 RNVU1-3-201ENST00000364313 161 ntBASIC2.17□□□□□ -2.06
CXCL1P09341 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms