Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.38□□□□□ -1.55
APPP05067 RN7SKP244-201ENST00000516513 307 ntBASIC5.38□□□□□ -1.55
APPP05067 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.38□□□□□ -1.55
APPP05067 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.38□□□□□ -1.55
APPP05067 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.38□□□□□ -1.55
APPP05067 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.38□□□□□ -1.55
APPP05067 AC135001.1-201ENST00000544546 283 ntBASIC5.38□□□□□ -1.55
APPP05067 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.38□□□□□ -1.55
APPP05067 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
APPP05067 AC103792.1-201ENST00000603591 919 ntBASIC5.38□□□□□ -1.55
APPP05067 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.38□□□□□ -1.55
APPP05067 AC012409.3-201ENST00000611343 981 ntBASIC5.38□□□□□ -1.55
APPP05067 RMST_9.1-201ENST00000619945 193 ntBASIC5.38□□□□□ -1.55
APPP05067 AC138649.3-201ENST00000622154 254 ntBASIC5.38□□□□□ -1.55
APPP05067 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.38□□□□□ -1.55
APPP05067 CPHL1P-201ENST00000461341 3407 ntBASIC5.38□□□□□ -1.55
APPP05067 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.38□□□□□ -1.55
APPP05067 NXPH1-205ENST00000602349 1953 ntBASIC5.38□□□□□ -1.55
APPP05067 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
APPP05067 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
APPP05067 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
APPP05067 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.38□□□□□ -1.55
APPP05067 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.38□□□□□ -1.55
APPP05067 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
APPP05067 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
APPP05067 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
APPP05067 AC139769.1-204ENST00000472297 1931 ntBASIC5.37□□□□□ -1.55
APPP05067 OR4G2P-201ENST00000328113 903 ntBASIC5.37□□□□□ -1.55
APPP05067 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
APPP05067 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.37□□□□□ -1.55
APPP05067 HMGB1P17-201ENST00000403495 628 ntBASIC5.37□□□□□ -1.55
APPP05067 RPS3AP3-201ENST00000411933 242 ntBASIC5.37□□□□□ -1.55
APPP05067 AC009237.10-201ENST00000414112 510 ntBASIC5.37□□□□□ -1.55
APPP05067 RAC1P3-201ENST00000416129 580 ntBASIC5.37□□□□□ -1.55
APPP05067 BX295541.1-201ENST00000417774 250 ntBASIC5.37□□□□□ -1.55
APPP05067 EIF1P1-201ENST00000421436 341 ntBASIC5.37□□□□□ -1.55
APPP05067 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.37□□□□□ -1.55
APPP05067 AL035410.1-201ENST00000427409 427 ntBASIC5.37□□□□□ -1.55
APPP05067 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.37□□□□□ -1.55
APPP05067 AC109583.1-201ENST00000432156 268 ntBASIC5.37□□□□□ -1.55
APPP05067 CEACAMP1-201ENST00000434624 1035 ntBASIC5.37□□□□□ -1.55
APPP05067 H2AFZP6-201ENST00000444403 394 ntBASIC5.37□□□□□ -1.55
APPP05067 RPL7P36-201ENST00000444633 681 ntBASIC5.37□□□□□ -1.55
APPP05067 AP000542.1-201ENST00000448473 371 ntBASIC5.37□□□□□ -1.55
APPP05067 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
APPP05067 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.37□□□□□ -1.55
APPP05067 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
APPP05067 ACTR3P3-201ENST00000480448 893 ntBASIC5.37□□□□□ -1.55
APPP05067 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.37□□□□□ -1.55
APPP05067 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.37□□□□□ -1.55
APPP05067 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.37□□□□□ -1.55
APPP05067 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.37□□□□□ -1.55
APPP05067 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.37□□□□□ -1.55
APPP05067 RNA5SP216-201ENST00000516111 123 ntBASIC5.37□□□□□ -1.55
APPP05067 RNU6-314P-201ENST00000516574 104 ntBASIC5.37□□□□□ -1.55
APPP05067 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.37□□□□□ -1.55
APPP05067 ZNF705CP-201ENST00000530515 889 ntBASIC5.37□□□□□ -1.55
APPP05067 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.37□□□□□ -1.55
APPP05067 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.37□□□□□ -1.55
APPP05067 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.37□□□□□ -1.55
APPP05067 HSPE1P3-201ENST00000559254 309 ntBASIC5.37□□□□□ -1.55
APPP05067 AC092325.1-201ENST00000566449 554 ntBASIC5.37□□□□□ -1.55
APPP05067 AL121834.1-201ENST00000572284 509 ntBASIC5.37□□□□□ -1.55
APPP05067 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.37□□□□□ -1.55
APPP05067 HMGN1P30-201ENST00000589286 268 ntBASIC5.37□□□□□ -1.55
APPP05067 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.37□□□□□ -1.55
APPP05067 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.37□□□□□ -1.55
APPP05067 BPIFA4P-203ENST00000603168 689 ntBASIC5.37□□□□□ -1.55
APPP05067 AC090578.1-201ENST00000604955 591 ntBASIC5.37□□□□□ -1.55
APPP05067 OR6R2P-201ENST00000609216 300 ntBASIC5.37□□□□□ -1.55
APPP05067 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.37□□□□□ -1.55
APPP05067 AC116447.1-201ENST00000613153 453 ntBASIC5.37□□□□□ -1.55
APPP05067 AC068880.5-201ENST00000624331 290 ntBASIC5.37□□□□□ -1.55
APPP05067 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
APPP05067 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.37□□□□□ -1.55
APPP05067 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
APPP05067 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
APPP05067 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
APPP05067 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.37□□□□□ -1.55
APPP05067 LINC00622-201ENST00000562811 1570 ntBASIC5.37□□□□□ -1.55
APPP05067 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
APPP05067 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
APPP05067 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.36□□□□□ -1.55
APPP05067 LINC00561-201ENST00000565815 2738 ntBASIC5.36□□□□□ -1.55
APPP05067 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.36□□□□□ -1.55
APPP05067 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.36□□□□□ -1.55
APPP05067 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
APPP05067 RNU6-780P-201ENST00000391030 104 ntBASIC5.36□□□□□ -1.55
APPP05067 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
APPP05067 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.36□□□□□ -1.55
APPP05067 RNA5SP146-201ENST00000410743 123 ntBASIC5.36□□□□□ -1.55
APPP05067 AC069218.2-201ENST00000411665 344 ntBASIC5.36□□□□□ -1.55
APPP05067 AL160275.2-201ENST00000412010 394 ntBASIC5.36□□□□□ -1.55
APPP05067 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.36□□□□□ -1.55
APPP05067 TMSB10P2-201ENST00000416049 131 ntBASIC5.36□□□□□ -1.55
APPP05067 USP9YP36-201ENST00000424581 829 ntBASIC5.36□□□□□ -1.55
APPP05067 RPL23AP25-201ENST00000430973 463 ntBASIC5.36□□□□□ -1.55
APPP05067 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.36□□□□□ -1.55
APPP05067 GAPDHP17-201ENST00000449858 1001 ntBASIC5.36□□□□□ -1.55
APPP05067 AC009220.1-201ENST00000451614 275 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms