Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SPTA1P02549 RPS29P6-201ENST00000438196 145 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC2.28□□□□□ -2.04
SPTA1P02549 FGF7P3-201ENST00000454645 303 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 AC087385.1-201ENST00000475062 312 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 RPL23AP45-201ENST00000476406 468 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 RN7SL283P-201ENST00000489055 303 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTA1P02549 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTA1P02549 RN7SKP96-201ENST00000516948 297 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTA1P02549 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.28□□□□□ -2.04
SPTA1P02549 AC126177.3-201ENST00000551839 688 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.28□□□□□ -2.04
SPTA1P02549 AC105137.2-201ENST00000569073 466 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 RPL23AP84-201ENST00000571193 464 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 SNORA4-201ENST00000584302 138 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTA1P02549 MIR6873-201ENST00000622788 63 ntBASIC2.28□□□□□ -2.04
SPTA1P02549 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.27□□□□□ -2.05
SPTA1P02549 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SPTA1P02549 AL359893.1-201ENST00000447628 1580 ntBASIC2.27□□□□□ -2.05
SPTA1P02549 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.27□□□□□ -2.05
SPTA1P02549 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SPTA1P02549 SNORA46-201ENST00000384762 135 ntBASIC2.27□□□□□ -2.05
SPTA1P02549 NPM1P10-201ENST00000398310 865 ntBASIC2.27□□□□□ -2.05
SPTA1P02549 AL121834.1-202ENST00000404494 277 ntBASIC2.27□□□□□ -2.05
SPTA1P02549 RANP7-201ENST00000418085 644 ntBASIC2.27□□□□□ -2.05
SPTA1P02549 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.27□□□□□ -2.05
SPTA1P02549 AC008716.1-201ENST00000511084 513 ntBASIC2.27□□□□□ -2.05
SPTA1P02549 AC092436.3-201ENST00000511788 257 ntBASIC2.27□□□□□ -2.05
SPTA1P02549 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.27□□□□□ -2.05
SPTA1P02549 AC092628.2-201ENST00000622492 339 ntBASIC2.27□□□□□ -2.05
SPTA1P02549 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.27□□□□□ -2.05
SPTA1P02549 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.27□□□□□ -2.05
SPTA1P02549 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SPTA1P02549 AL031985.3-201ENST00000565390 2449 ntBASIC2.27□□□□□ -2.05
SPTA1P02549 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SPTA1P02549 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SPTA1P02549 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.27□□□□□ -2.05
SPTA1P02549 CYCSP49-201ENST00000420810 319 ntBASIC2.27□□□□□ -2.05
SPTA1P02549 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.27□□□□□ -2.05
SPTA1P02549 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.27□□□□□ -2.05
SPTA1P02549 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.27□□□□□ -2.05
SPTA1P02549 CACYBPP2-201ENST00000453625 678 ntBASIC2.27□□□□□ -2.05
SPTA1P02549 AP001086.1-201ENST00000494882 321 ntBASIC2.27□□□□□ -2.05
SPTA1P02549 AF186190.1-201ENST00000517470 480 ntBASIC2.27□□□□□ -2.05
SPTA1P02549 AC110994.2-201ENST00000635481 492 ntBASIC2.27□□□□□ -2.05
SPTA1P02549 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.27□□□□□ -2.05
SPTA1P02549 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SPTA1P02549 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SPTA1P02549 RNU6-661P-201ENST00000362409 107 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 BTF3P7-201ENST00000407097 488 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 RPL30P2-201ENST00000414021 291 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC2.26□□□□□ -2.05
SPTA1P02549 AC104389.3-201ENST00000445629 235 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 AL354710.1-201ENST00000453641 246 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 RNA5SP281-201ENST00000516504 135 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 RN7SKP234-201ENST00000517173 224 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 CKS1BP7-201ENST00000522230 235 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.26□□□□□ -2.05
SPTA1P02549 MTCYBP28-201ENST00000566728 1132 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC2.26□□□□□ -2.05
SPTA1P02549 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SPTA1P02549 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SPTA1P02549 AP000936.3-201ENST00000438127 255 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 AC004866.2-201ENST00000438285 481 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.26□□□□□ -2.05
SPTA1P02549 ST13P20-201ENST00000447996 1065 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 AC245166.1-201ENST00000521012 253 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 AL133271.1-201ENST00000538229 291 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.26□□□□□ -2.05
SPTA1P02549 MIR4635-201ENST00000583759 79 ntBASIC2.26□□□□□ -2.05
SPTA1P02549 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.26□□□□□ -2.05
SPTA1P02549 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.26□□□□□ -2.05
SPTA1P02549 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
SPTA1P02549 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SPTA1P02549 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
SPTA1P02549 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SPTA1P02549 RNU1-75P-201ENST00000347264 129 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 MIR423-201ENST00000362201 94 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 RNA5SP88-201ENST00000365560 109 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 RPS7P13-201ENST00000413955 498 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 RPS12P23-201ENST00000419579 400 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SPTA1P02549 CR769767.1-201ENST00000436337 346 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.25□□□□□ -2.05
SPTA1P02549 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.25□□□□□ -2.05
SPTA1P02549 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.25□□□□□ -2.05
SPTA1P02549 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.25□□□□□ -2.05
SPTA1P02549 APOOP1-201ENST00000604695 592 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 AL158196.1-201ENST00000616786 434 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.25□□□□□ -2.05
SPTA1P02549 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.25□□□□□ -2.05
SPTA1P02549 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC2.25□□□□□ -2.05
SPTA1P02549 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.25□□□□□ -2.05
SPTA1P02549 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
SPTA1P02549 RNU6-582P-201ENST00000362989 107 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 RN7SKP32-201ENST00000410167 303 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 CEACAMP4-201ENST00000457676 421 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms