Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RN7SL703P-201ENST00000578485 302 ntBASIC3.93□□□□□ -1.78
LDLRP01130 OR4K7P-201ENST00000580232 945 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.93□□□□□ -1.78
LDLRP01130 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.93□□□□□ -1.78
LDLRP01130 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.93□□□□□ -1.78
LDLRP01130 DEFB131E-202ENST00000602581 683 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AL031281.1-201ENST00000604049 488 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC009220.3-201ENST00000604318 586 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC091946.2-201ENST00000606105 291 ntBASIC3.93□□□□□ -1.78
LDLRP01130 OR2AS2P-201ENST00000606902 342 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC135507.1-201ENST00000607214 561 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC069200.1-201ENST00000609511 323 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AL603755.1-201ENST00000619504 163 ntBASIC3.93□□□□□ -1.78
LDLRP01130 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LDLRP01130 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LDLRP01130 AL773545.4-201ENST00000637262 310 ntBASIC3.93□□□□□ -1.78
LDLRP01130 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.93□□□□□ -1.78
LDLRP01130 AL513478.4-201ENST00000641636 310 ntBASIC3.93□□□□□ -1.78
LDLRP01130 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LDLRP01130 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.93□□□□□ -1.78
LDLRP01130 AL356473.1-201ENST00000406203 1408 ntBASIC3.93□□□□□ -1.78
LDLRP01130 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LDLRP01130 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
LDLRP01130 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LDLRP01130 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LDLRP01130 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LDLRP01130 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.93□□□□□ -1.78
LDLRP01130 AC005539.1-201ENST00000443768 1479 ntBASIC3.92□□□□□ -1.78
LDLRP01130 ELL2P3-201ENST00000457883 1602 ntBASIC3.92□□□□□ -1.78
LDLRP01130 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.92□□□□□ -1.78
LDLRP01130 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LDLRP01130 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LDLRP01130 OR4A15-201ENST00000314706 1035 ntBASIC3.92□□□□□ -1.78
LDLRP01130 AC007685.1-201ENST00000329806 452 ntBASIC3.92□□□□□ -1.78
LDLRP01130 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
LDLRP01130 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LDLRP01130 MIR649-201ENST00000384843 97 ntBASIC3.92□□□□□ -1.78
LDLRP01130 RNU2-28P-201ENST00000410457 189 ntBASIC3.92□□□□□ -1.78
LDLRP01130 AC073264.1-201ENST00000411508 416 ntBASIC3.92□□□□□ -1.78
LDLRP01130 AC069218.2-201ENST00000411665 344 ntBASIC3.92□□□□□ -1.78
LDLRP01130 AC068533.2-201ENST00000411872 306 ntBASIC3.92□□□□□ -1.78
LDLRP01130 OR8G2P-201ENST00000412796 908 ntBASIC3.92□□□□□ -1.78
LDLRP01130 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.92□□□□□ -1.78
LDLRP01130 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.92□□□□□ -1.78
LDLRP01130 AL035407.1-201ENST00000429211 571 ntBASIC3.92□□□□□ -1.78
LDLRP01130 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.92□□□□□ -1.78
LDLRP01130 ATP5HP2-201ENST00000433885 485 ntBASIC3.92□□□□□ -1.78
LDLRP01130 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LDLRP01130 RPS29P7-201ENST00000439662 171 ntBASIC3.92□□□□□ -1.78
LDLRP01130 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.92□□□□□ -1.78
LDLRP01130 UBE2D3P4-201ENST00000441973 436 ntBASIC3.92□□□□□ -1.78
LDLRP01130 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.92□□□□□ -1.78
LDLRP01130 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.92□□□□□ -1.78
LDLRP01130 AL133547.1-201ENST00000448546 220 ntBASIC3.92□□□□□ -1.78
LDLRP01130 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.92□□□□□ -1.78
LDLRP01130 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.92□□□□□ -1.78
LDLRP01130 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.92□□□□□ -1.78
LDLRP01130 AC111000.2-201ENST00000507775 550 ntBASIC3.92□□□□□ -1.78
LDLRP01130 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.92□□□□□ -1.78
LDLRP01130 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.92□□□□□ -1.78
LDLRP01130 AC026726.1-201ENST00000512859 601 ntBASIC3.92□□□□□ -1.78
LDLRP01130 Vault.1-201ENST00000516474 102 ntBASIC3.92□□□□□ -1.78
LDLRP01130 NARSP2-201ENST00000518524 679 ntBASIC3.92□□□□□ -1.78
LDLRP01130 AC027309.2-201ENST00000520566 192 ntBASIC3.92□□□□□ -1.78
LDLRP01130 MTCYBP20-201ENST00000524239 1129 ntBASIC3.92□□□□□ -1.78
LDLRP01130 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LDLRP01130 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.92□□□□□ -1.78
LDLRP01130 AC024909.2-201ENST00000553035 286 ntBASIC3.92□□□□□ -1.78
LDLRP01130 AC008015.1-201ENST00000555505 465 ntBASIC3.92□□□□□ -1.78
LDLRP01130 TVP23BP1-201ENST00000557500 617 ntBASIC3.92□□□□□ -1.78
LDLRP01130 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.92□□□□□ -1.78
LDLRP01130 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.92□□□□□ -1.78
LDLRP01130 AP003117.2-201ENST00000606010 545 ntBASIC3.92□□□□□ -1.78
LDLRP01130 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.92□□□□□ -1.78
LDLRP01130 AL450489.1-201ENST00000612071 468 ntBASIC3.92□□□□□ -1.78
LDLRP01130 AL139418.1-201ENST00000613613 177 ntBASIC3.92□□□□□ -1.78
LDLRP01130 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
LDLRP01130 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.92□□□□□ -1.78
LDLRP01130 AP005264.7-201ENST00000625003 745 ntBASIC3.92□□□□□ -1.78
LDLRP01130 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LDLRP01130 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.92□□□□□ -1.78
LDLRP01130 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.92□□□□□ -1.78
LDLRP01130 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.92□□□□□ -1.78
LDLRP01130 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.92□□□□□ -1.78
LDLRP01130 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LDLRP01130 CDR1-202ENST00000625883 1485 ntBASIC3.92□□□□□ -1.78
LDLRP01130 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.92□□□□□ -1.78
LDLRP01130 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LDLRP01130 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.91□□□□□ -1.78
LDLRP01130 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LDLRP01130 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.91□□□□□ -1.78
LDLRP01130 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.91□□□□□ -1.78
LDLRP01130 RNU6-1243P-201ENST00000364028 107 ntBASIC3.91□□□□□ -1.78
LDLRP01130 Y_RNA.311-201ENST00000365068 96 ntBASIC3.91□□□□□ -1.78
LDLRP01130 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LDLRP01130 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
LDLRP01130 MTCO1P21-201ENST00000416634 589 ntBASIC3.91□□□□□ -1.78
LDLRP01130 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.91□□□□□ -1.78
LDLRP01130 AC096632.1-201ENST00000427395 310 ntBASIC3.91□□□□□ -1.78
LDLRP01130 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms