Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD3O95983 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.54□□□□□ -1.84
MBD3O95983 AC113368.1-201ENST00000603736 382 ntBASIC3.54□□□□□ -1.84
MBD3O95983 AC002487.1-201ENST00000604565 994 ntBASIC3.54□□□□□ -1.84
MBD3O95983 AC073348.1-201ENST00000623002 331 ntBASIC3.54□□□□□ -1.84
MBD3O95983 AC243312.2-201ENST00000623340 601 ntBASIC3.54□□□□□ -1.84
MBD3O95983 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.54□□□□□ -1.84
MBD3O95983 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.53□□□□□ -1.84
MBD3O95983 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
MBD3O95983 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MBD3O95983 MIR181B1-201ENST00000385240 110 ntBASIC3.53□□□□□ -1.84
MBD3O95983 SNORD88.1-201ENST00000408684 91 ntBASIC3.53□□□□□ -1.84
MBD3O95983 RNA5SP56-201ENST00000410277 118 ntBASIC3.53□□□□□ -1.84
MBD3O95983 AC007390.1-201ENST00000415722 356 ntBASIC3.53□□□□□ -1.84
MBD3O95983 AL451074.5-201ENST00000415894 435 ntBASIC3.53□□□□□ -1.84
MBD3O95983 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.53□□□□□ -1.84
MBD3O95983 SFR1P2-201ENST00000421841 730 ntBASIC3.53□□□□□ -1.84
MBD3O95983 NEK4P1-201ENST00000433383 879 ntBASIC3.53□□□□□ -1.84
MBD3O95983 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.53□□□□□ -1.84
MBD3O95983 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.53□□□□□ -1.84
MBD3O95983 AC004022.1-201ENST00000447766 1066 ntBASIC3.53□□□□□ -1.84
MBD3O95983 RPL5P24-201ENST00000463742 885 ntBASIC3.53□□□□□ -1.84
MBD3O95983 AC106707.2-201ENST00000484182 374 ntBASIC3.53□□□□□ -1.84
MBD3O95983 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.53□□□□□ -1.84
MBD3O95983 AC021678.1-201ENST00000505195 936 ntBASIC3.53□□□□□ -1.84
MBD3O95983 RNA5SP135-201ENST00000517019 125 ntBASIC3.53□□□□□ -1.84
MBD3O95983 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.53□□□□□ -1.84
MBD3O95983 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.53□□□□□ -1.84
MBD3O95983 HIGD1AP10-201ENST00000527837 282 ntBASIC3.53□□□□□ -1.84
MBD3O95983 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.53□□□□□ -1.84
MBD3O95983 AC092451.2-201ENST00000538746 658 ntBASIC3.53□□□□□ -1.84
MBD3O95983 AC007224.1-201ENST00000564410 144 ntBASIC3.53□□□□□ -1.84
MBD3O95983 AC107954.1-201ENST00000565906 727 ntBASIC3.53□□□□□ -1.84
MBD3O95983 AC012182.1-201ENST00000570133 895 ntBASIC3.53□□□□□ -1.84
MBD3O95983 AL513477.2-201ENST00000607858 568 ntBASIC3.53□□□□□ -1.84
MBD3O95983 AC098679.5-201ENST00000624394 571 ntBASIC3.53□□□□□ -1.84
MBD3O95983 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.53□□□□□ -1.84
MBD3O95983 AC007256.1-201ENST00000392253 2765 ntBASIC3.53□□□□□ -1.84
MBD3O95983 AL355596.1-201ENST00000565399 3996 ntBASIC3.53□□□□□ -1.84
MBD3O95983 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.52□□□□□ -1.85
MBD3O95983 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
MBD3O95983 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
MBD3O95983 OR1L1-202ENST00000373686 1083 ntBASIC3.52□□□□□ -1.85
MBD3O95983 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MBD3O95983 RNU6-837P-201ENST00000391056 108 ntBASIC3.52□□□□□ -1.85
MBD3O95983 AL355615.1-201ENST00000406187 641 ntBASIC3.52□□□□□ -1.85
MBD3O95983 BX842559.1-201ENST00000419615 532 ntBASIC3.52□□□□□ -1.85
MBD3O95983 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.52□□□□□ -1.85
MBD3O95983 AC006548.1-201ENST00000427470 102 ntBASIC3.52□□□□□ -1.85
MBD3O95983 UBE2V1P6-201ENST00000430840 422 ntBASIC3.52□□□□□ -1.85
MBD3O95983 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.52□□□□□ -1.85
MBD3O95983 RPL7P59-201ENST00000447700 943 ntBASIC3.52□□□□□ -1.85
MBD3O95983 AC009220.1-201ENST00000451614 275 ntBASIC3.52□□□□□ -1.85
MBD3O95983 RPL21P41-201ENST00000459863 264 ntBASIC3.52□□□□□ -1.85
MBD3O95983 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.52□□□□□ -1.85
MBD3O95983 OR5H5P-201ENST00000503164 928 ntBASIC3.52□□□□□ -1.85
MBD3O95983 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.52□□□□□ -1.85
MBD3O95983 IGKV2D-36-201ENST00000518643 226 ntBASIC3.52□□□□□ -1.85
MBD3O95983 AP003355.1-201ENST00000518956 587 ntBASIC3.52□□□□□ -1.85
MBD3O95983 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.52□□□□□ -1.85
MBD3O95983 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.52□□□□□ -1.85
MBD3O95983 MTCYBP41-201ENST00000528913 1123 ntBASIC3.52□□□□□ -1.85
MBD3O95983 AP003385.6-201ENST00000531603 374 ntBASIC3.52□□□□□ -1.85
MBD3O95983 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.52□□□□□ -1.85
MBD3O95983 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.52□□□□□ -1.85
MBD3O95983 SYF2P1-201ENST00000550658 413 ntBASIC3.52□□□□□ -1.85
MBD3O95983 ZNF415P1-201ENST00000582279 1166 ntBASIC3.52□□□□□ -1.85
MBD3O95983 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.52□□□□□ -1.85
MBD3O95983 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.52□□□□□ -1.85
MBD3O95983 RPAP2P1-201ENST00000603626 1168 ntBASIC3.52□□□□□ -1.85
MBD3O95983 AC009464.1-201ENST00000615731 469 ntBASIC3.52□□□□□ -1.85
MBD3O95983 MIR8058-201ENST00000615737 89 ntBASIC3.52□□□□□ -1.85
MBD3O95983 AC018926.1-201ENST00000616335 435 ntBASIC3.52□□□□□ -1.85
MBD3O95983 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
MBD3O95983 Z99129.2-201ENST00000619967 314 ntBASIC3.52□□□□□ -1.85
MBD3O95983 CR381572.1-201ENST00000625098 102 ntBASIC3.52□□□□□ -1.85
MBD3O95983 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.52□□□□□ -1.85
MBD3O95983 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.52□□□□□ -1.85
MBD3O95983 MAPK10-362ENST00000641864 4484 ntBASIC3.52□□□□□ -1.85
MBD3O95983 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MBD3O95983 AL672296.1-201ENST00000427780 2158 ntBASIC3.51□□□□□ -1.85
MBD3O95983 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.51□□□□□ -1.85
MBD3O95983 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.51□□□□□ -1.85
MBD3O95983 SNORA63.3-201ENST00000362682 132 ntBASIC3.51□□□□□ -1.85
MBD3O95983 RNU6-236P-201ENST00000363886 106 ntBASIC3.51□□□□□ -1.85
MBD3O95983 RNU1-85P-201ENST00000364127 164 ntBASIC3.51□□□□□ -1.85
MBD3O95983 RNU6-115P-201ENST00000364310 107 ntBASIC3.51□□□□□ -1.85
MBD3O95983 SNORA51.2-201ENST00000364595 132 ntBASIC3.51□□□□□ -1.85
MBD3O95983 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.51□□□□□ -1.85
MBD3O95983 FO393414.1-201ENST00000428697 1184 ntBASIC3.51□□□□□ -1.85
MBD3O95983 AL590103.1-201ENST00000434488 307 ntBASIC3.51□□□□□ -1.85
MBD3O95983 RPS7P2-201ENST00000435134 607 ntBASIC3.51□□□□□ -1.85
MBD3O95983 AC234064.1-201ENST00000436312 247 ntBASIC3.51□□□□□ -1.85
MBD3O95983 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.51□□□□□ -1.85
MBD3O95983 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.51□□□□□ -1.85
MBD3O95983 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.51□□□□□ -1.85
MBD3O95983 RPS4XP13-201ENST00000483219 789 ntBASIC3.51□□□□□ -1.85
MBD3O95983 HMGB1P38-201ENST00000490557 577 ntBASIC3.51□□□□□ -1.85
MBD3O95983 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.51□□□□□ -1.85
MBD3O95983 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms