Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCD1O75127 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PTCD1O75127 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PTCD1O75127 AC092079.1-201ENST00000558620 1985 ntBASIC6.37□□□□□ -1.39
PTCD1O75127 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PTCD1O75127 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
PTCD1O75127 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCD1O75127 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCD1O75127 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCD1O75127 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PTCD1O75127 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCD1O75127 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PTCD1O75127 RNA5SP391-201ENST00000363456 119 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 RNU6-1293P-201ENST00000384077 107 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 RNU6-784P-201ENST00000384330 106 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 RNU6-1207P-201ENST00000384343 107 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCD1O75127 COX6CP15-201ENST00000426313 211 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 AL590233.1-201ENST00000430017 456 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.36□□□□□ -1.39
PTCD1O75127 AL590639.1-201ENST00000456484 337 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 AL136126.1-201ENST00000473603 402 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.36□□□□□ -1.39
PTCD1O75127 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.36□□□□□ -1.39
PTCD1O75127 AC026782.1-201ENST00000512952 449 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 SNORD60.2-201ENST00000516883 86 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 RNA5SP337-201ENST00000517007 109 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 AC090572.1-201ENST00000519251 160 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6.36□□□□□ -1.39
PTCD1O75127 AC024224.1-201ENST00000538284 609 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 AC023050.3-201ENST00000541142 333 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.36□□□□□ -1.39
PTCD1O75127 MIR4284-201ENST00000578924 81 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 MIR3171-201ENST00000584270 74 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 AC006116.10-201ENST00000591836 581 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.36□□□□□ -1.39
PTCD1O75127 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.36□□□□□ -1.39
PTCD1O75127 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.36□□□□□ -1.39
PTCD1O75127 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.36□□□□□ -1.39
PTCD1O75127 RNU6-156P-201ENST00000621869 107 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 AL356585.4-201ENST00000623078 1229 ntBASIC6.36□□□□□ -1.39
PTCD1O75127 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.36□□□□□ -1.39
PTCD1O75127 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCD1O75127 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCD1O75127 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.36□□□□□ -1.39
PTCD1O75127 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PTCD1O75127 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.36□□□□□ -1.39
PTCD1O75127 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PTCD1O75127 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCD1O75127 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCD1O75127 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PTCD1O75127 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PTCD1O75127 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
PTCD1O75127 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
PTCD1O75127 MTND5P33-201ENST00000571250 1450 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
PTCD1O75127 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PTCD1O75127 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.35□□□□□ -1.39
PTCD1O75127 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
PTCD1O75127 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PTCD1O75127 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PTCD1O75127 RNA5SP453-201ENST00000362503 119 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 SNORA51.2-201ENST00000364595 132 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 RNU6-1318P-201ENST00000365389 103 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PTCD1O75127 U3.22-201ENST00000391120 215 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 RNA5SP241-201ENST00000391326 114 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AL035079.1-201ENST00000405210 287 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 RN7SKP32-201ENST00000410167 303 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 RN7SKP235-201ENST00000410662 305 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AC069218.2-201ENST00000411665 344 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 TBCAP2-201ENST00000416175 326 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 BX510359.2-201ENST00000417920 305 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 NCOR1P3-201ENST00000420479 303 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.35□□□□□ -1.39
PTCD1O75127 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.35□□□□□ -1.39
PTCD1O75127 USP9YP16-201ENST00000430287 407 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.35□□□□□ -1.39
PTCD1O75127 AC024082.2-201ENST00000434771 238 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AC114495.1-201ENST00000441274 436 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 BRK1P2-201ENST00000442875 223 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AC243772.1-201ENST00000451620 410 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 USP9YP23-201ENST00000455085 407 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 MTCO2P29-201ENST00000465212 189 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 RPS23P7-201ENST00000466210 444 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 RPL23AP41-201ENST00000484754 458 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC6.35□□□□□ -1.39
PTCD1O75127 AK3P4-201ENST00000504283 583 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AC103851.1-201ENST00000506833 274 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 RNA5SP116-201ENST00000516132 98 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 BTF3P12-201ENST00000519620 469 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.35□□□□□ -1.39
PTCD1O75127 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.35□□□□□ -1.39
PTCD1O75127 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.35□□□□□ -1.39
PTCD1O75127 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.35□□□□□ -1.39
PTCD1O75127 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PTCD1O75127 RN7SL290P-201ENST00000578661 300 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms