Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL121834.1-202ENST00000404494 277 ntBASIC4.05□□□□□ -1.76
LDB2O43679 Y_RNA.599-201ENST00000410489 109 ntBASIC4.05□□□□□ -1.76
LDB2O43679 RNU6-628P-201ENST00000410675 107 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.05□□□□□ -1.76
LDB2O43679 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.05□□□□□ -1.76
LDB2O43679 AC083875.1-201ENST00000419509 405 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AC092647.1-201ENST00000420654 287 ntBASIC4.05□□□□□ -1.76
LDB2O43679 RPS12P5-201ENST00000423449 371 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AL512649.1-201ENST00000428997 581 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.05□□□□□ -1.76
LDB2O43679 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.05□□□□□ -1.76
LDB2O43679 AC023347.2-201ENST00000433994 462 ntBASIC4.05□□□□□ -1.76
LDB2O43679 OR4C10P-201ENST00000434991 931 ntBASIC4.05□□□□□ -1.76
LDB2O43679 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.05□□□□□ -1.76
LDB2O43679 AL353748.1-201ENST00000440753 474 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.05□□□□□ -1.76
LDB2O43679 BMI1P1-201ENST00000445879 941 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.05□□□□□ -1.76
LDB2O43679 RPL39P6-201ENST00000448289 150 ntBASIC4.05□□□□□ -1.76
LDB2O43679 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.05□□□□□ -1.76
LDB2O43679 AC010469.1-201ENST00000463864 576 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AC092757.1-201ENST00000467293 467 ntBASIC4.05□□□□□ -1.76
LDB2O43679 RN7SL271P-201ENST00000487601 295 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AC025445.1-201ENST00000502728 300 ntBASIC4.05□□□□□ -1.76
LDB2O43679 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.05□□□□□ -1.76
LDB2O43679 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LDB2O43679 AC079140.3-201ENST00000511111 550 ntBASIC4.05□□□□□ -1.76
LDB2O43679 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.05□□□□□ -1.76
LDB2O43679 AC006499.2-201ENST00000513470 337 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.05□□□□□ -1.76
LDB2O43679 SNORD116-26-201ENST00000516006 96 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.05□□□□□ -1.76
LDB2O43679 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.05□□□□□ -1.76
LDB2O43679 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.05□□□□□ -1.76
LDB2O43679 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.05□□□□□ -1.76
LDB2O43679 GTF2IP22-201ENST00000554443 182 ntBASIC4.05□□□□□ -1.76
LDB2O43679 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.05□□□□□ -1.76
LDB2O43679 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.05□□□□□ -1.76
LDB2O43679 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.05□□□□□ -1.76
LDB2O43679 DEFB131E-202ENST00000602581 683 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AC008638.3-201ENST00000603341 463 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AC239868.4-201ENST00000608318 671 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AC100793.4-201ENST00000613683 429 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AC009509.4-201ENST00000619202 509 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AP006248.2-201ENST00000623309 592 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AC025048.6-202ENST00000627667 438 ntBASIC4.05□□□□□ -1.76
LDB2O43679 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LDB2O43679 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
LDB2O43679 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.05□□□□□ -1.76
LDB2O43679 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LDB2O43679 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LDB2O43679 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
LDB2O43679 MTCO1P23-201ENST00000415223 1526 ntBASIC4.05□□□□□ -1.76
LDB2O43679 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.05□□□□□ -1.76
LDB2O43679 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.05□□□□□ -1.76
LDB2O43679 MTND5P29-201ENST00000458676 1807 ntBASIC4.05□□□□□ -1.76
LDB2O43679 AC117529.2-201ENST00000512159 2068 ntBASIC4.04□□□□□ -1.76
LDB2O43679 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LDB2O43679 AC087190.4-201ENST00000574616 8334 ntBASIC4.04□□□□□ -1.76
LDB2O43679 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LDB2O43679 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.04□□□□□ -1.76
LDB2O43679 PABPC1P9-201ENST00000426076 1612 ntBASIC4.04□□□□□ -1.76
LDB2O43679 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LDB2O43679 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LDB2O43679 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LDB2O43679 MIR448-201ENST00000362131 111 ntBASIC4.04□□□□□ -1.76
LDB2O43679 RNU6-1293P-201ENST00000384077 107 ntBASIC4.04□□□□□ -1.76
LDB2O43679 RNU6-441P-201ENST00000384545 106 ntBASIC4.04□□□□□ -1.76
LDB2O43679 RNY3P10-201ENST00000384764 102 ntBASIC4.04□□□□□ -1.76
LDB2O43679 RPL31P52-201ENST00000407532 367 ntBASIC4.04□□□□□ -1.76
LDB2O43679 RNA5SP317-201ENST00000410176 116 ntBASIC4.04□□□□□ -1.76
LDB2O43679 RNU2-16P-201ENST00000410712 136 ntBASIC4.04□□□□□ -1.76
LDB2O43679 RNA5SP311-201ENST00000411290 116 ntBASIC4.04□□□□□ -1.76
LDB2O43679 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.04□□□□□ -1.76
LDB2O43679 AC108032.1-201ENST00000416706 207 ntBASIC4.04□□□□□ -1.76
LDB2O43679 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LDB2O43679 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.04□□□□□ -1.76
LDB2O43679 AC011742.1-201ENST00000431448 434 ntBASIC4.04□□□□□ -1.76
LDB2O43679 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.04□□□□□ -1.76
LDB2O43679 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.04□□□□□ -1.76
LDB2O43679 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.04□□□□□ -1.76
LDB2O43679 RPS24P1-201ENST00000438550 371 ntBASIC4.04□□□□□ -1.76
LDB2O43679 AC069285.2-201ENST00000440210 275 ntBASIC4.04□□□□□ -1.76
LDB2O43679 AC092641.1-201ENST00000440229 772 ntBASIC4.04□□□□□ -1.76
LDB2O43679 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.04□□□□□ -1.76
LDB2O43679 VN1R10P-201ENST00000447106 875 ntBASIC4.04□□□□□ -1.76
LDB2O43679 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.04□□□□□ -1.76
LDB2O43679 ST13P20-201ENST00000447996 1065 ntBASIC4.04□□□□□ -1.76
LDB2O43679 EPS15P1-201ENST00000448836 336 ntBASIC4.04□□□□□ -1.76
LDB2O43679 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.04□□□□□ -1.76
LDB2O43679 AL162388.1-201ENST00000450912 352 ntBASIC4.04□□□□□ -1.76
LDB2O43679 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.04□□□□□ -1.76
LDB2O43679 RPL5P32-201ENST00000454085 879 ntBASIC4.04□□□□□ -1.76
LDB2O43679 MTCO3P2-201ENST00000457365 171 ntBASIC4.04□□□□□ -1.76
LDB2O43679 RNA5SP269-201ENST00000459032 137 ntBASIC4.04□□□□□ -1.76
LDB2O43679 RPL5P30-201ENST00000465511 891 ntBASIC4.04□□□□□ -1.76
LDB2O43679 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.04□□□□□ -1.76
LDB2O43679 FTH1P24-201ENST00000503502 462 ntBASIC4.04□□□□□ -1.76
LDB2O43679 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LDB2O43679 AC026412.2-201ENST00000512270 1075 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms