Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LSM1O15116 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM1O15116 AC084824.1-201ENST00000550917 1005 ntBASIC3.21□□□□□ -1.9
LSM1O15116 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM1O15116 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM1O15116 AC006116.7-201ENST00000590141 756 ntBASIC3.21□□□□□ -1.9
LSM1O15116 XIAPP1-201ENST00000603162 600 ntBASIC3.21□□□□□ -1.9
LSM1O15116 AL513477.2-201ENST00000607858 568 ntBASIC3.21□□□□□ -1.9
LSM1O15116 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM1O15116 AC245100.7-201ENST00000609678 442 ntBASIC3.21□□□□□ -1.9
LSM1O15116 AL110115.1-201ENST00000614396 364 ntBASIC3.21□□□□□ -1.9
LSM1O15116 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.21□□□□□ -1.9
LSM1O15116 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM1O15116 AC132825.7-201ENST00000638744 335 ntBASIC3.21□□□□□ -1.9
LSM1O15116 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM1O15116 AC009093.8-201ENST00000641769 292 ntBASIC3.21□□□□□ -1.9
LSM1O15116 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM1O15116 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM1O15116 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LSM1O15116 AC130650.2-201ENST00000618736 2403 ntBASIC3.2□□□□□ -1.9
LSM1O15116 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM1O15116 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LSM1O15116 AL589826.1-201ENST00000340697 249 ntBASIC3.2□□□□□ -1.9
LSM1O15116 MIR525-201ENST00000384978 85 ntBASIC3.2□□□□□ -1.9
LSM1O15116 SNORD65C-201ENST00000390962 71 ntBASIC3.2□□□□□ -1.9
LSM1O15116 MTND4LP20-201ENST00000402379 270 ntBASIC3.2□□□□□ -1.9
LSM1O15116 CYCSP19-201ENST00000411715 316 ntBASIC3.2□□□□□ -1.9
LSM1O15116 NIPA2P1-201ENST00000426223 976 ntBASIC3.2□□□□□ -1.9
LSM1O15116 AL035246.1-201ENST00000433554 1255 ntBASIC3.2□□□□□ -1.9
LSM1O15116 AL512661.1-201ENST00000434586 1253 ntBASIC3.2□□□□□ -1.9
LSM1O15116 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.2□□□□□ -1.9
LSM1O15116 AC004022.1-201ENST00000447766 1066 ntBASIC3.2□□□□□ -1.9
LSM1O15116 AC140076.1-201ENST00000449897 361 ntBASIC3.2□□□□□ -1.9
LSM1O15116 MTND2P30-201ENST00000456663 382 ntBASIC3.2□□□□□ -1.9
LSM1O15116 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM1O15116 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM1O15116 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM1O15116 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM1O15116 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM1O15116 PRELID3BP4-201ENST00000515476 571 ntBASIC3.2□□□□□ -1.9
LSM1O15116 RNA5SP468-201ENST00000516782 93 ntBASIC3.2□□□□□ -1.9
LSM1O15116 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.2□□□□□ -1.9
LSM1O15116 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM1O15116 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM1O15116 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM1O15116 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM1O15116 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM1O15116 AC074051.3-201ENST00000570238 358 ntBASIC3.2□□□□□ -1.9
LSM1O15116 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM1O15116 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.2□□□□□ -1.9
LSM1O15116 AC068831.7-201ENST00000616954 363 ntBASIC3.2□□□□□ -1.9
LSM1O15116 AL356321.1-201ENST00000621360 228 ntBASIC3.2□□□□□ -1.9
LSM1O15116 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM1O15116 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.2□□□□□ -1.9
LSM1O15116 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM1O15116 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM1O15116 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM1O15116 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM1O15116 AL645568.2-201ENST00000432815 1337 ntBASIC3.19□□□□□ -1.9
LSM1O15116 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM1O15116 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM1O15116 AC092447.7-201ENST00000422212 1621 ntBASIC3.19□□□□□ -1.9
LSM1O15116 RNU4-35P-201ENST00000362588 141 ntBASIC3.19□□□□□ -1.9
LSM1O15116 RNU1-70P-201ENST00000362618 164 ntBASIC3.19□□□□□ -1.9
LSM1O15116 RNU6-650P-201ENST00000365658 111 ntBASIC3.19□□□□□ -1.9
LSM1O15116 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LSM1O15116 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LSM1O15116 AL359837.1-201ENST00000381357 287 ntBASIC3.19□□□□□ -1.9
LSM1O15116 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM1O15116 AL591034.1-201ENST00000407447 340 ntBASIC3.19□□□□□ -1.9
LSM1O15116 MIR1193-201ENST00000408109 78 ntBASIC3.19□□□□□ -1.9
LSM1O15116 AC008173.1-201ENST00000418901 264 ntBASIC3.19□□□□□ -1.9
LSM1O15116 AL606495.1-201ENST00000422100 813 ntBASIC3.19□□□□□ -1.9
LSM1O15116 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.19□□□□□ -1.9
LSM1O15116 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM1O15116 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM1O15116 Z99127.3-201ENST00000448158 395 ntBASIC3.19□□□□□ -1.9
LSM1O15116 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM1O15116 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.19□□□□□ -1.9
LSM1O15116 HMGB1P25-201ENST00000468402 607 ntBASIC3.19□□□□□ -1.9
LSM1O15116 AC106707.2-201ENST00000484182 374 ntBASIC3.19□□□□□ -1.9
LSM1O15116 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM1O15116 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM1O15116 MTND4LP31-201ENST00000514859 294 ntBASIC3.19□□□□□ -1.9
LSM1O15116 RNU1-143P-201ENST00000516296 146 ntBASIC3.19□□□□□ -1.9
LSM1O15116 RNU6-56P-201ENST00000516986 93 ntBASIC3.19□□□□□ -1.9
LSM1O15116 AC104986.1-201ENST00000517978 436 ntBASIC3.19□□□□□ -1.9
LSM1O15116 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM1O15116 AC019227.1-201ENST00000526902 510 ntBASIC3.19□□□□□ -1.9
LSM1O15116 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LSM1O15116 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM1O15116 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM1O15116 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM1O15116 AC015917.1-201ENST00000579654 510 ntBASIC3.19□□□□□ -1.9
LSM1O15116 AP001029.3-201ENST00000588063 596 ntBASIC3.19□□□□□ -1.9
LSM1O15116 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM1O15116 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM1O15116 AL671309.1-201ENST00000603750 544 ntBASIC3.19□□□□□ -1.9
LSM1O15116 AC025588.3-201ENST00000604182 274 ntBASIC3.19□□□□□ -1.9
LSM1O15116 U1.23-201ENST00000610293 146 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms