Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDX4O14627 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDX4O14627 DBF4P1-201ENST00000412976 1892 ntBASIC3.31□□□□□ -1.88
CDX4O14627 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.31□□□□□ -1.88
CDX4O14627 MTCO1P14-201ENST00000441695 1559 ntBASIC3.31□□□□□ -1.88
CDX4O14627 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDX4O14627 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.31□□□□□ -1.88
CDX4O14627 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDX4O14627 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CDX4O14627 OR1L1-202ENST00000373686 1083 ntBASIC3.31□□□□□ -1.88
CDX4O14627 MTCO1P56-201ENST00000401674 224 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AL592310.1-201ENST00000414330 671 ntBASIC3.31□□□□□ -1.88
CDX4O14627 RAC1P3-201ENST00000416129 580 ntBASIC3.31□□□□□ -1.88
CDX4O14627 NUP35P2-201ENST00000416748 943 ntBASIC3.31□□□□□ -1.88
CDX4O14627 PAICSP7-201ENST00000419829 962 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.31□□□□□ -1.88
CDX4O14627 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.31□□□□□ -1.88
CDX4O14627 PPIAP17-201ENST00000438507 471 ntBASIC3.31□□□□□ -1.88
CDX4O14627 RPS26P56-201ENST00000444468 240 ntBASIC3.31□□□□□ -1.88
CDX4O14627 RPL37P6-202ENST00000464216 403 ntBASIC3.31□□□□□ -1.88
CDX4O14627 RN7SL594P-201ENST00000470590 287 ntBASIC3.31□□□□□ -1.88
CDX4O14627 PRDX3P4-201ENST00000470828 747 ntBASIC3.31□□□□□ -1.88
CDX4O14627 GAPDHP39-201ENST00000481866 979 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AC069528.1-202ENST00000482888 637 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AC139783.2-201ENST00000504847 1145 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AC020699.1-201ENST00000505161 445 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.31□□□□□ -1.88
CDX4O14627 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.31□□□□□ -1.88
CDX4O14627 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.31□□□□□ -1.88
CDX4O14627 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.31□□□□□ -1.88
CDX4O14627 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.31□□□□□ -1.88
CDX4O14627 AP001207.1-201ENST00000524051 481 ntBASIC3.31□□□□□ -1.88
CDX4O14627 DEFB130C-202ENST00000530001 230 ntBASIC3.31□□□□□ -1.88
CDX4O14627 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDX4O14627 AC022080.3-201ENST00000544433 482 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AC004217.3-201ENST00000551552 878 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.31□□□□□ -1.88
CDX4O14627 AL132857.1-201ENST00000555180 708 ntBASIC3.31□□□□□ -1.88
CDX4O14627 MTCYBP23-201ENST00000558717 1102 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.31□□□□□ -1.88
CDX4O14627 MIR4666A-201ENST00000580160 79 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.31□□□□□ -1.88
CDX4O14627 AL450336.1-201ENST00000605180 586 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AC113194.1-201ENST00000606037 500 ntBASIC3.31□□□□□ -1.88
CDX4O14627 RNU4-5P-201ENST00000607255 135 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AC093732.2-201ENST00000607950 274 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AC078899.5-201ENST00000612475 178 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AC009464.1-201ENST00000615731 469 ntBASIC3.31□□□□□ -1.88
CDX4O14627 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.31□□□□□ -1.88
CDX4O14627 AL137790.1-201ENST00000634283 177 ntBASIC3.31□□□□□ -1.88
CDX4O14627 AL732372.2-225ENST00000642124 456 ntBASIC3.31□□□□□ -1.88
CDX4O14627 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDX4O14627 AC107081.3-201ENST00000612715 2034 ntBASIC3.31□□□□□ -1.88
CDX4O14627 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
CDX4O14627 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDX4O14627 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDX4O14627 MFSD8-233ENST00000641482 4860 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AC016716.1-201ENST00000265882 708 ntBASIC3.3□□□□□ -1.88
CDX4O14627 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.3□□□□□ -1.88
CDX4O14627 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CDX4O14627 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDX4O14627 RNU6-224P-201ENST00000384055 107 ntBASIC3.3□□□□□ -1.88
CDX4O14627 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDX4O14627 SFR1P1-201ENST00000403720 688 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.3□□□□□ -1.88
CDX4O14627 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.3□□□□□ -1.88
CDX4O14627 NANOGP5-201ENST00000424456 877 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.3□□□□□ -1.88
CDX4O14627 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.3□□□□□ -1.88
CDX4O14627 AL513175.1-201ENST00000431492 780 ntBASIC3.3□□□□□ -1.88
CDX4O14627 MTND2P5-201ENST00000432656 1006 ntBASIC3.3□□□□□ -1.88
CDX4O14627 MTND1P31-201ENST00000449206 961 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.3□□□□□ -1.88
CDX4O14627 NPM1P13-201ENST00000452663 865 ntBASIC3.3□□□□□ -1.88
CDX4O14627 SNORD108-201ENST00000459332 71 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.3□□□□□ -1.88
CDX4O14627 AC109925.1-201ENST00000478069 331 ntBASIC3.3□□□□□ -1.88
CDX4O14627 RPL7P38-201ENST00000488396 739 ntBASIC3.3□□□□□ -1.88
CDX4O14627 RPL21P131-201ENST00000497298 483 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.3□□□□□ -1.88
CDX4O14627 AC090071.1-201ENST00000507713 644 ntBASIC3.3□□□□□ -1.88
CDX4O14627 RN7SKP287-201ENST00000516546 266 ntBASIC3.3□□□□□ -1.88
CDX4O14627 RN7SKP209-201ENST00000516888 304 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AC023632.1-201ENST00000518463 375 ntBASIC3.3□□□□□ -1.88
CDX4O14627 IGLVIV-53-201ENST00000520107 367 ntBASIC3.3□□□□□ -1.88
CDX4O14627 OR4R3P-201ENST00000525084 838 ntBASIC3.3□□□□□ -1.88
CDX4O14627 MTCO3P15-201ENST00000526563 574 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.3□□□□□ -1.88
CDX4O14627 AC090888.2-201ENST00000559765 1144 ntBASIC3.3□□□□□ -1.88
CDX4O14627 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.3□□□□□ -1.88
CDX4O14627 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.3□□□□□ -1.88
CDX4O14627 AC006557.5-201ENST00000603126 811 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AC093424.1-201ENST00000604999 338 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AL365400.2-201ENST00000605604 902 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AP000238.1-201ENST00000608759 426 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AC004908.3-201ENST00000610248 625 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AC079395.3-201ENST00000615161 484 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AC004825.2-201ENST00000616634 455 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AC007998.5-201ENST00000622938 237 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AC104985.3-201ENST00000623479 597 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms