Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AL133393.1-201ENST00000603277 287 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 LLPHP1-201ENST00000603571 367 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 AC135803.1-201ENST00000608748 565 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 AC092184.1-201ENST00000625042 715 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
UBFD1O14562 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.73□□□□□ -1.97
UBFD1O14562 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
UBFD1O14562 AL161431.1-201ENST00000618966 4205 ntBASIC2.73□□□□□ -1.97
UBFD1O14562 AC096644.4-201ENST00000563417 2912 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 ANKRD36P1-201ENST00000344424 659 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 NACA3P-201ENST00000359690 648 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 SNORA31-201ENST00000362607 130 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 RNU2-6P-201ENST00000411404 190 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 XKRYP4-201ENST00000414395 483 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.72□□□□□ -1.97
UBFD1O14562 AC022018.1-201ENST00000430685 241 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 AL513043.1-201ENST00000439124 535 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.72□□□□□ -1.97
UBFD1O14562 AC023512.1-201ENST00000444513 499 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 MRPL50P4-201ENST00000446432 475 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 XKRYP5-201ENST00000449659 483 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 TPMTP4-201ENST00000450749 678 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 HMGB1P26-201ENST00000452520 628 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.72□□□□□ -1.97
UBFD1O14562 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.72□□□□□ -1.97
UBFD1O14562 RPL21P8-201ENST00000465083 535 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 RPS26P21-201ENST00000475397 348 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 RPS29P26-201ENST00000477483 171 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 RPL21P103-201ENST00000479921 488 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 AC080014.1-201ENST00000496877 1201 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 AC097462.2-201ENST00000504623 481 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
UBFD1O14562 AC108120.2-201ENST00000512973 294 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.72□□□□□ -1.97
UBFD1O14562 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.72□□□□□ -1.97
UBFD1O14562 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.72□□□□□ -1.97
UBFD1O14562 CR383656.14-201ENST00000551951 406 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 AL121603.1-201ENST00000553815 142 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.72□□□□□ -1.97
UBFD1O14562 AL355836.1-201ENST00000555951 870 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.72□□□□□ -1.97
UBFD1O14562 AL157394.1-201ENST00000562983 1224 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.72□□□□□ -1.97
UBFD1O14562 MIR3605-201ENST00000583214 100 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 AC078899.3-201ENST00000599065 212 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 OR2AS2P-201ENST00000606902 342 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 AC073348.1-201ENST00000623002 331 ntBASIC2.72□□□□□ -1.97
UBFD1O14562 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
UBFD1O14562 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.71□□□□□ -1.97
UBFD1O14562 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
UBFD1O14562 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
UBFD1O14562 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.71□□□□□ -1.98
UBFD1O14562 MIR153-1-201ENST00000384914 90 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 SAR1AP2-201ENST00000392696 594 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 DHFRP5-201ENST00000406944 564 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 MIR1289-1-201ENST00000408836 144 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 VN1R51P-201ENST00000411675 945 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 AC010385.1-201ENST00000412374 256 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 USP9YP36-201ENST00000424581 829 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 MED6P1-201ENST00000439659 713 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.71□□□□□ -1.98
UBFD1O14562 AC012181.1-201ENST00000479895 423 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 AC107398.1-201ENST00000486904 505 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 AP001025.2-201ENST00000490908 477 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 AC090071.1-201ENST00000507713 644 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 SCGB1D5P-201ENST00000515134 247 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 SNORA9.3-201ENST00000516383 129 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.71□□□□□ -1.98
UBFD1O14562 AC107016.2-201ENST00000547968 190 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.71□□□□□ -1.98
UBFD1O14562 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.71□□□□□ -1.98
UBFD1O14562 ZNF861P-201ENST00000588126 639 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 AP004372.1-201ENST00000604842 844 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 AC073111.2-201ENST00000605657 1075 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 AC093732.2-201ENST00000607950 274 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 ATP5A1P2-202ENST00000616464 443 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 AC121761.2-201ENST00000617300 689 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 AP004607.9-201ENST00000618202 316 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 AC006065.5-201ENST00000623427 349 ntBASIC2.71□□□□□ -1.98
UBFD1O14562 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
UBFD1O14562 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
UBFD1O14562 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
UBFD1O14562 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
UBFD1O14562 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.7□□□□□ -1.98
UBFD1O14562 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.7□□□□□ -1.98
UBFD1O14562 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.7□□□□□ -1.98
UBFD1O14562 RNA5SP391-201ENST00000363456 119 ntBASIC2.7□□□□□ -1.98
UBFD1O14562 SNORA80A-201ENST00000363922 136 ntBASIC2.7□□□□□ -1.98
UBFD1O14562 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
UBFD1O14562 UBE2V1P2-201ENST00000397758 440 ntBASIC2.7□□□□□ -1.98
UBFD1O14562 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.7□□□□□ -1.98
UBFD1O14562 RPL35AP12-201ENST00000425362 338 ntBASIC2.7□□□□□ -1.98
UBFD1O14562 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
UBFD1O14562 ARL5AP2-201ENST00000444698 533 ntBASIC2.7□□□□□ -1.98
UBFD1O14562 COX6CP2-201ENST00000444980 225 ntBASIC2.7□□□□□ -1.98
UBFD1O14562 RPS4XP13-201ENST00000483219 789 ntBASIC2.7□□□□□ -1.98
UBFD1O14562 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.7□□□□□ -1.98
UBFD1O14562 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.7□□□□□ -1.98
UBFD1O14562 AC113192.3-201ENST00000529152 742 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms