Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 RPL23AP22-201ENST00000437556 453 ntBASIC3.14□□□□□ -1.91
CDC7O00311 HSFY3P-201ENST00000444242 1191 ntBASIC3.14□□□□□ -1.91
CDC7O00311 PRDX3P3-201ENST00000447765 522 ntBASIC3.14□□□□□ -1.91
CDC7O00311 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDC7O00311 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.14□□□□□ -1.91
CDC7O00311 PRDX3P4-201ENST00000470828 747 ntBASIC3.14□□□□□ -1.91
CDC7O00311 HMGB1P38-201ENST00000490557 577 ntBASIC3.14□□□□□ -1.91
CDC7O00311 RNF138P1-201ENST00000502765 546 ntBASIC3.14□□□□□ -1.91
CDC7O00311 AC026427.2-201ENST00000506228 536 ntBASIC3.14□□□□□ -1.91
CDC7O00311 RN7SKP244-201ENST00000516513 307 ntBASIC3.14□□□□□ -1.91
CDC7O00311 SCARNA13-201ENST00000516672 275 ntBASIC3.14□□□□□ -1.91
CDC7O00311 RPL12P22-201ENST00000519073 490 ntBASIC3.14□□□□□ -1.91
CDC7O00311 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.14□□□□□ -1.91
CDC7O00311 AC107954.1-201ENST00000565906 727 ntBASIC3.14□□□□□ -1.91
CDC7O00311 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.14□□□□□ -1.91
CDC7O00311 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.14□□□□□ -1.91
CDC7O00311 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.14□□□□□ -1.91
CDC7O00311 AL020997.3-201ENST00000602843 359 ntBASIC3.14□□□□□ -1.91
CDC7O00311 AC073657.2-201ENST00000605661 303 ntBASIC3.14□□□□□ -1.91
CDC7O00311 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CDC7O00311 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.14□□□□□ -1.91
CDC7O00311 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
CDC7O00311 AC073055.1-201ENST00000456901 1621 ntBASIC3.14□□□□□ -1.91
CDC7O00311 RNU6-263P-201ENST00000363811 107 ntBASIC3.13□□□□□ -1.91
CDC7O00311 SNORA7.2-201ENST00000364446 145 ntBASIC3.13□□□□□ -1.91
CDC7O00311 U3.11-201ENST00000364476 212 ntBASIC3.13□□□□□ -1.91
CDC7O00311 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDC7O00311 DYNLT3P1-201ENST00000378574 347 ntBASIC3.13□□□□□ -1.91
CDC7O00311 SSXP10-201ENST00000402595 565 ntBASIC3.13□□□□□ -1.91
CDC7O00311 PTGES3P2-201ENST00000407942 482 ntBASIC3.13□□□□□ -1.91
CDC7O00311 RPF2P1-201ENST00000424137 906 ntBASIC3.13□□□□□ -1.91
CDC7O00311 RPP40P1-201ENST00000426762 456 ntBASIC3.13□□□□□ -1.91
CDC7O00311 AC006994.1-201ENST00000438212 839 ntBASIC3.13□□□□□ -1.91
CDC7O00311 SLC31A1P1-201ENST00000451221 567 ntBASIC3.13□□□□□ -1.91
CDC7O00311 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.13□□□□□ -1.91
CDC7O00311 RPL7P5-201ENST00000471472 736 ntBASIC3.13□□□□□ -1.91
CDC7O00311 SETP6-201ENST00000479329 568 ntBASIC3.13□□□□□ -1.91
CDC7O00311 RPL31P13-201ENST00000484151 370 ntBASIC3.13□□□□□ -1.91
CDC7O00311 CAB39P1-201ENST00000502277 460 ntBASIC3.13□□□□□ -1.91
CDC7O00311 WBP1LP4-201ENST00000505043 344 ntBASIC3.13□□□□□ -1.91
CDC7O00311 AC112518.2-201ENST00000508565 425 ntBASIC3.13□□□□□ -1.91
CDC7O00311 AC074250.1-201ENST00000511117 192 ntBASIC3.13□□□□□ -1.91
CDC7O00311 AC087272.1-201ENST00000523624 533 ntBASIC3.13□□□□□ -1.91
CDC7O00311 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.13□□□□□ -1.91
CDC7O00311 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.13□□□□□ -1.91
CDC7O00311 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.13□□□□□ -1.91
CDC7O00311 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.13□□□□□ -1.91
CDC7O00311 MIR3200-201ENST00000580767 85 ntBASIC3.13□□□□□ -1.91
CDC7O00311 AC022069.1-201ENST00000582910 658 ntBASIC3.13□□□□□ -1.91
CDC7O00311 AP004247.3-201ENST00000608682 624 ntBASIC3.13□□□□□ -1.91
CDC7O00311 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.13□□□□□ -1.91
CDC7O00311 AL591516.1-201ENST00000611326 274 ntBASIC3.13□□□□□ -1.91
CDC7O00311 AC100793.4-201ENST00000613683 429 ntBASIC3.13□□□□□ -1.91
CDC7O00311 uc_338.25-201ENST00000613756 156 ntBASIC3.13□□□□□ -1.91
CDC7O00311 AC106730.3-201ENST00000624568 641 ntBASIC3.13□□□□□ -1.91
CDC7O00311 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDC7O00311 AC068620.4-201ENST00000636730 1182 ntBASIC3.13□□□□□ -1.91
CDC7O00311 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.13□□□□□ -1.91
CDC7O00311 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CDC7O00311 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDC7O00311 AL592494.2-201ENST00000425455 1548 ntBASIC3.13□□□□□ -1.91
CDC7O00311 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.13□□□□□ -1.91
CDC7O00311 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDC7O00311 MTND5P1-201ENST00000445440 1375 ntBASIC3.12□□□□□ -1.91
CDC7O00311 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDC7O00311 AL138880.1-201ENST00000405824 642 ntBASIC3.12□□□□□ -1.91
CDC7O00311 RPL32P35-201ENST00000415214 394 ntBASIC3.12□□□□□ -1.91
CDC7O00311 BX664727.1-201ENST00000416024 466 ntBASIC3.12□□□□□ -1.91
CDC7O00311 AC009237.2-201ENST00000421358 284 ntBASIC3.12□□□□□ -1.91
CDC7O00311 AC246680.2-201ENST00000422106 389 ntBASIC3.12□□□□□ -1.91
CDC7O00311 AC012498.1-201ENST00000424037 437 ntBASIC3.12□□□□□ -1.91
CDC7O00311 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.12□□□□□ -1.91
CDC7O00311 RPL21P112-201ENST00000434403 463 ntBASIC3.12□□□□□ -1.91
CDC7O00311 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.12□□□□□ -1.91
CDC7O00311 AC078857.1-201ENST00000469870 667 ntBASIC3.12□□□□□ -1.91
CDC7O00311 ST13P14-201ENST00000474095 734 ntBASIC3.12□□□□□ -1.91
CDC7O00311 RPL32P34-201ENST00000486380 400 ntBASIC3.12□□□□□ -1.91
CDC7O00311 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.12□□□□□ -1.91
CDC7O00311 AC114967.1-201ENST00000504890 259 ntBASIC3.12□□□□□ -1.91
CDC7O00311 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.12□□□□□ -1.91
CDC7O00311 HMGB3P15-201ENST00000507326 574 ntBASIC3.12□□□□□ -1.91
CDC7O00311 PRELID3BP4-201ENST00000515476 571 ntBASIC3.12□□□□□ -1.91
CDC7O00311 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.12□□□□□ -1.91
CDC7O00311 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.12□□□□□ -1.91
CDC7O00311 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.12□□□□□ -1.91
CDC7O00311 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.12□□□□□ -1.91
CDC7O00311 AC124293.1-201ENST00000530034 493 ntBASIC3.12□□□□□ -1.91
CDC7O00311 AP000889.1-201ENST00000530968 660 ntBASIC3.12□□□□□ -1.91
CDC7O00311 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.12□□□□□ -1.91
CDC7O00311 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDC7O00311 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDC7O00311 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.12□□□□□ -1.91
CDC7O00311 AC092470.1-201ENST00000546187 132 ntBASIC3.12□□□□□ -1.91
CDC7O00311 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.12□□□□□ -1.91
CDC7O00311 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.12□□□□□ -1.91
CDC7O00311 AC010198.2-201ENST00000550612 259 ntBASIC3.12□□□□□ -1.91
CDC7O00311 AC011611.5-201ENST00000552477 578 ntBASIC3.12□□□□□ -1.91
CDC7O00311 NIFKP8-201ENST00000560500 874 ntBASIC3.12□□□□□ -1.91
CDC7O00311 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.12□□□□□ -1.91
CDC7O00311 AC005412.1-201ENST00000580812 1049 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms