Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MTATP6P20-201ENST00000414147 562 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 RPS3AP9-201ENST00000417027 792 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 Z75741.2-201ENST00000417272 1167 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 RPS15AP40-201ENST00000419621 391 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AC005326.1-201ENST00000429197 123 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 MTCO1P3-201ENST00000429327 192 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AL591503.2-201ENST00000442314 1005 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 RPS26P56-201ENST00000444468 240 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AL589880.1-201ENST00000448271 287 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AC007967.1-201ENST00000455422 1159 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AL136097.1-201ENST00000456945 913 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 CEACAMP4-201ENST00000457676 421 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AC069528.1-202ENST00000482888 637 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 MIR3912-201ENST00000577566 105 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 HSPE1P14-201ENST00000605812 302 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 AC117529.2-201ENST00000512159 2068 ntBASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
NEDD8-MDP1E9PL57 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 SAGE4P-201ENST00000442271 3381 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 RNU6-251P-201ENST00000363235 104 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 RNU6-525P-201ENST00000363685 104 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 RNU6-115P-201ENST00000364310 107 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC092648.1-201ENST00000425870 423 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC006989.1-201ENST00000427212 131 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC008065.1-201ENST00000428525 348 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 HMGN3P1-201ENST00000453847 193 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC010307.1-201ENST00000467206 836 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 RPL23AP44-201ENST00000482216 473 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC093663.1-201ENST00000497190 394 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 SNX5P1-201ENST00000505757 1041 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 FCF1P8-201ENST00000510322 597 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 RN7SKP277-201ENST00000516895 283 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AP000926.4-201ENST00000527351 454 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 PTP4A1P6-201ENST00000531034 478 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 MIR4504-201ENST00000577413 92 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AP001180.3-201ENST00000582221 145 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC009974.1-201ENST00000608881 455 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 MIR3651-201ENST00000630427 90 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 ZNF663P-202ENST00000641770 1131 ntBASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NEDD8-MDP1E9PL57 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.53□□□□□ -1.84
NEDD8-MDP1E9PL57 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms