Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 MTND2P32-201ENST00000521584 1038 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AP004242.1-201ENST00000533701 349 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC007458.1-201ENST00000542812 373 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC087897.1-201ENST00000550134 156 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC053481.3-201ENST00000577881 843 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 MTCO2P2-201ENST00000591258 225 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AL391001.1-201ENST00000602747 715 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC100793.4-201ENST00000613683 429 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 U6.48-201ENST00000618523 106 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC006386.1-201ENST00000619436 415 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 MIR6075-201ENST00000620782 95 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 MIR4278-201ENST00000636094 69 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC093908.1-201ENST00000623125 8092 ntBASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM49D1C9J1S8 AC111188.2-201ENST00000529697 1387 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AC110754.1-201ENST00000399740 601 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 RNU4-22P-201ENST00000411058 166 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 RPS29P4-201ENST00000414733 161 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 SFR1P2-201ENST00000421841 730 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 PTP4A1P7-201ENST00000423476 514 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 RPS24P8-201ENST00000431490 402 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AC092685.1-201ENST00000447960 1243 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AL358232.1-201ENST00000448030 501 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 MTND2P8-201ENST00000450555 1025 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 ELOCP23-201ENST00000452014 332 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 snoU109.3-201ENST00000459477 145 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AC078785.3-201ENST00000476607 425 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AC104687.1-201ENST00000485829 412 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 RN7SKP43-201ENST00000516173 320 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 RNU2-58P-201ENST00000516403 183 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 PTP4A1P6-201ENST00000531034 478 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 NIFKP8-201ENST00000560500 874 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 ATP5F1P7-201ENST00000567330 760 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 ZNF415P1-201ENST00000582279 1166 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 BNIP3P33-201ENST00000598912 569 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 BNIP3P4-201ENST00000604946 565 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AP002802.2-201ENST00000605877 235 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 MIR7973-1-201ENST00000614683 76 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AC090772.4-201ENST00000623599 362 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AC008993.2-201ENST00000631744 806 ntBASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM49D1C9J1S8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AP001148.1-201ENST00000624124 2359 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AF127577.6-201ENST00000623352 2191 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AC005183.1-201ENST00000603687 1979 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 RNU6-317P-201ENST00000384031 107 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 MIR153-1-201ENST00000384914 90 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 RNU6-575P-201ENST00000411326 105 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 NDUFB4P5-201ENST00000415445 361 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AC092634.2-201ENST00000428146 1010 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 MTCYBP31-201ENST00000438855 1122 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 MRPL35P4-201ENST00000453682 566 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms