Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TMEM88BA6NKF7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AC019155.1-201ENST00000382242 574 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 Y_RNA.384-201ENST00000383909 102 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 DBIP1-201ENST00000401435 260 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AL359643.1-201ENST00000404109 423 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 RNU4-65P-201ENST00000410473 140 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 RNU2-47P-201ENST00000410649 186 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AC068533.1-201ENST00000418542 415 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AL137014.1-201ENST00000420490 1226 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 RPL23AP43-201ENST00000446445 471 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 RPL7L1P8-201ENST00000469911 741 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 RPL21P99-201ENST00000480369 423 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 RN7SL319P-201ENST00000480656 221 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AC135721.1-201ENST00000497954 479 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AC023818.1-201ENST00000498379 384 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AC103851.1-201ENST00000506833 274 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 RNA5SP464-201ENST00000516251 108 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 RN7SKP219-201ENST00000516825 296 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 RNU6-64P-201ENST00000517119 105 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AC068870.1-201ENST00000563737 2455 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 RN7SL690P-201ENST00000582087 240 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AL669831.4-202ENST00000590817 238 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AC093388.1-201ENST00000609166 430 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AL160413.1-201ENST00000622780 310 ntBASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TMEM88BA6NKF7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 AL355834.1-201ENST00000556602 3965 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 RNU6-552P-201ENST00000362869 119 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 SNORA70E-201ENST00000384492 135 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 SNORA66-201ENST00000384792 133 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 RN7SKP159-201ENST00000410657 292 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 RNU6-387P-201ENST00000411331 105 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 AL138785.1-201ENST00000425821 331 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 AC236972.2-201ENST00000434979 310 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 RPS29P10-201ENST00000439197 166 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 AC007677.1-201ENST00000445757 515 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 OR1H1P-201ENST00000448731 937 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 SNRPFP3-201ENST00000457792 225 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 RN7SL189P-201ENST00000468631 289 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 AC107953.1-201ENST00000522216 297 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 PSMA2P1-201ENST00000526365 646 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 ANP32BP3-201ENST00000559213 706 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 MIR4775-201ENST00000581168 75 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 AC093227.2-201ENST00000589357 285 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 AC005034.5-201ENST00000604219 466 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 RNU6-89P-201ENST00000606519 100 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 MIR6716-201ENST00000613413 80 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 DDX10P1-201ENST00000448545 1933 ntBASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TMEM88BA6NKF7 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms