Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SNORA81-201ENST00000408493 178 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 RNA5SP492-201ENST00000411330 114 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 EI24P1-201ENST00000416584 867 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AC241520.1-201ENST00000422654 1099 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AL031736.2-201ENST00000426573 787 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 RPL17P49-201ENST00000443728 411 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 RPL37P6-202ENST00000464216 403 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AP000852.1-201ENST00000472460 573 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AC093663.2-201ENST00000484625 313 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 VN1R104P-201ENST00000505115 1009 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 RNU4-60P-201ENST00000517239 135 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AC061975.8-201ENST00000587058 721 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AC113368.1-201ENST00000603736 382 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AC067747.1-201ENST00000608026 250 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 AC002546.1-201ENST00000588041 2504 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 AL136520.1-201ENST00000600311 1322 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 SNORD62.1-201ENST00000362541 86 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 SNORA38.1-201ENST00000364172 131 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 USP9YP36-201ENST00000424581 829 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 RPL35AP12-201ENST00000425362 338 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 AL135938.1-201ENST00000443141 297 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 NECAP1P2-201ENST00000455668 727 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 AL136126.1-201ENST00000473603 402 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 AC068587.1-201ENST00000483613 781 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 HIGD1AP5-201ENST00000529959 259 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 AC090695.1-201ENST00000561269 1222 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 AC125494.3-201ENST00000602759 455 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 AC019131.2-201ENST00000609071 870 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 AC022079.2-201ENST00000619739 566 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 MIR6810-201ENST00000622701 70 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 AP000676.4-201ENST00000624659 623 ntBASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TCRBV3S1A0A5B6 AP000526.1-201ENST00000603308 1388 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 ATG3P1-201ENST00000419507 911 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 FNDC3CP-201ENST00000420795 1155 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 AL512649.1-201ENST00000428997 581 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 RPL23AP58-201ENST00000440453 469 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 UBBP3-201ENST00000445497 241 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 AL513328.1-201ENST00000446460 224 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 NF1P3-201ENST00000457709 450 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 RPL21P131-201ENST00000497298 483 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 RN7SKP234-201ENST00000517173 224 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 AC125611.2-201ENST00000551907 647 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 MIR4697-201ENST00000582977 78 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 BDH2P1-201ENST00000602288 736 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 AL592494.3-201ENST00000609485 464 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 MAPK10-322ENST00000641485 4530 ntBASIC2.28□□□□□ -2.04
TCRBV3S1A0A5B6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
TCRBV3S1A0A5B6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
TCRBV3S1A0A5B6 AC069528.2-201ENST00000624849 1991 ntBASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 OR51B8P-201ENST00000449892 769 ntBASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 SAP18P1-201ENST00000512058 390 ntBASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 AC005412.1-201ENST00000580812 1049 ntBASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.27□□□□□ -2.05
TCRBV3S1A0A5B6 DUXAP4-201ENST00000603046 613 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms