Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 AC092447.9-201ENST00000603395 144 ntBASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 AC104687.2-201ENST00000604442 342 ntBASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 AC018889.1-201ENST00000605372 397 ntBASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 AC062037.2-201ENST00000610137 73 ntBASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 U2.1-201ENST00000618978 145 ntBASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 AC000095.2-202ENST00000637415 154 ntBASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 PHKBP1-201ENST00000450951 1951 ntBASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHGA11Q9Y5H2 AP002512.4-202ENST00000641599 4530 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 RNA5SP375-201ENST00000362975 119 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 RNU6-701P-201ENST00000384059 107 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 Y_RNA.424-201ENST00000384063 103 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 Y_RNA.473-201ENST00000384333 102 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 RNU6-1109P-201ENST00000391187 107 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 Y_RNA.645-201ENST00000391229 102 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AC004386.1-201ENST00000393214 761 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 REREP1Y-201ENST00000422655 198 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AL389925.1-201ENST00000432257 728 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 HMGB3P24-201ENST00000433260 622 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AL591212.2-201ENST00000433923 257 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 MRPS18BP2-201ENST00000434310 759 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 REREP2Y-201ENST00000439103 200 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AL359672.1-201ENST00000442302 409 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AC097359.1-201ENST00000447946 463 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AL162739.1-201ENST00000450606 307 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AC007967.1-201ENST00000455422 1159 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 RPL12P30-201ENST00000488389 499 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 DEFB109F-201ENST00000491870 277 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 PGAM1P13-201ENST00000507497 754 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AC011411.1-201ENST00000509592 876 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 OR1F2P-201ENST00000570470 933 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AC005357.1-201ENST00000588399 301 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AC243312.2-201ENST00000623340 601 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AC073592.6-201ENST00000624271 415 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 AL359955.1-201ENST00000455242 3275 ntBASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA11Q9Y5H2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AC022325.1-201ENST00000502748 2199 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 Y_RNA.257-201ENST00000364596 102 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 Y_RNA.380-201ENST00000365663 111 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 RNU6-95P-201ENST00000384697 107 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AL445189.1-201ENST00000405722 338 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AL603908.1-201ENST00000406098 201 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 RPL35AP31-201ENST00000418340 337 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 RPL7AP51-201ENST00000422016 760 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 RPL12P12-201ENST00000424633 501 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 RPL7P37-201ENST00000425095 738 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms