Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 Z75741.2-201ENST00000417272 1167 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 KRR1P1-201ENST00000419430 803 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 MTND2P9-201ENST00000422293 931 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 GTF2IP23-201ENST00000423746 351 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 OR10R1P-201ENST00000441524 1141 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AL009048.1-201ENST00000450437 298 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 MTCO3P20-201ENST00000454926 688 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 DUXAP8-207ENST00000456786 622 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 RNU7-170P-201ENST00000459303 61 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC092451.1-201ENST00000480211 153 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC008489.1-201ENST00000524271 483 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC023161.2-201ENST00000551218 780 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 ZNF192P1-203ENST00000565888 810 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 MIR4429-201ENST00000580105 73 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 KLKP1-201ENST00000595979 403 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC245884.10-201ENST00000597355 337 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC069545.1-201ENST00000605671 358 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC091946.2-201ENST00000606105 291 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AL159169.3-201ENST00000608871 561 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 DUXAP10-204ENST00000612052 616 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC112200.1-201ENST00000625015 234 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 OR4G3P-201ENST00000633500 913 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AL365440.1-201ENST00000436135 2167 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 AC073073.2-201ENST00000609827 2578 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 CR381670.1-201ENST00000624291 1693 ntBASIC3.46□□□□□ -1.86
ATG4BQ9Y4P1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 GDI2P1-201ENST00000429312 1336 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AP001350.1-201ENST00000601906 1524 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC007066.1-201ENST00000392902 381 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 MTHFD2P2-201ENST00000407725 247 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 MTCO2P8-201ENST00000412213 658 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 LUZP4P1-201ENST00000415420 344 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC106883.1-201ENST00000418805 562 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC245054.1-201ENST00000420944 258 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 CYCSP43-201ENST00000438233 310 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 RPS24P6-201ENST00000452670 400 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 HMGN2P7-201ENST00000456186 273 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AL136097.1-201ENST00000456945 913 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AL136126.1-201ENST00000473603 402 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 HMGB1P22-201ENST00000505315 124 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AP001189.2-201ENST00000527320 189 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 GTF2IP8-201ENST00000560687 584 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AL049838.1-201ENST00000563647 981 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 MIR3912-201ENST00000577566 105 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AL390838.2-201ENST00000602394 274 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 RNU4-5P-201ENST00000607255 135 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC006023.2-201ENST00000609916 167 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC012531.5-201ENST00000611375 151 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AL392048.1-201ENST00000613946 534 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC008083.4-201ENST00000615076 444 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms