Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SNORA51.2-201ENST00000364595 132 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 RNA5SP235-201ENST00000365411 114 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 MTND4LP20-201ENST00000402379 270 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 RPL7P27-201ENST00000403775 720 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 Z98941.1-201ENST00000407764 100 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 FNDC3CP-201ENST00000420795 1155 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 RPL21P66-201ENST00000426566 466 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 CYCSP4-201ENST00000429682 331 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 VDAC1P3-201ENST00000434069 851 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC127537.2-201ENST00000439258 465 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC244505.3-201ENST00000454598 187 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 GAPDHP39-201ENST00000481866 979 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 OR5H5P-201ENST00000503164 928 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 DYNLL1P6-201ENST00000503440 264 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 HMGB3P15-201ENST00000507326 574 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 SNORA74D-201ENST00000516404 141 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 RN7SKP289-201ENST00000517244 295 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC019227.1-201ENST00000526902 510 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 ZNF705CP-201ENST00000530515 889 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC011611.1-201ENST00000552179 197 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 NCAPGP2-201ENST00000557911 754 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 MIR5195-201ENST00000583555 115 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC068620.3-201ENST00000602749 560 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC006254.3-201ENST00000603353 884 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AP003973.1-201ENST00000604639 691 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 DPRXP5-201ENST00000604662 539 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AL583856.2-201ENST00000606298 543 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC092574.1-201ENST00000609771 420 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC073968.1-201ENST00000618594 637 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AC069209.1-201ENST00000619282 651 ntBASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPIPA1Q9UND3 AP001350.1-201ENST00000601906 1524 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 RNA5SP267-201ENST00000364893 126 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AL391417.1-201ENST00000404100 426 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AL158156.1-201ENST00000422509 473 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 MTCYBP31-201ENST00000438855 1122 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 RPL23AP16-201ENST00000441715 421 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 ELOCP13-201ENST00000443934 329 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 COX6CP18-201ENST00000448769 222 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 RPL26P28-201ENST00000451325 435 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 TRBV26-201ENST00000456572 344 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 BX510359.1-201ENST00000456973 237 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 MTCO3P2-201ENST00000457365 171 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 RPS4XP10-201ENST00000465034 731 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AC025518.1-201ENST00000479856 347 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AC104417.1-201ENST00000523974 751 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AC109635.4-202ENST00000531666 412 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AC068339.2-201ENST00000534395 618 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AC023161.2-201ENST00000551218 780 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AC104072.1-201ENST00000568817 668 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 MIR3690-201ENST00000580266 75 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AL031985.2-201ENST00000600955 480 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AL442067.2-201ENST00000614033 363 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AL355365.1-201ENST00000616480 294 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AL512427.1-201ENST00000618593 349 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AL732618.1-201ENST00000623251 301 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AC092184.1-201ENST00000625042 715 ntBASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.26□□□□□ -1.89
NPIPA1Q9UND3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms