Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AC104333.2-201ENST00000422630 192 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 RPL7P57-201ENST00000423238 740 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AL031736.2-201ENST00000426573 787 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 GTF2IP20-201ENST00000431663 360 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 RSU1P2-202ENST00000437884 485 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 RPL7P54-201ENST00000438336 674 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 RNU6-420P-201ENST00000458780 107 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AC010683.1-201ENST00000473673 378 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 RPL39P36-201ENST00000490784 156 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 RNU6-1003P-201ENST00000517099 105 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AL442663.2-201ENST00000554385 511 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AC110743.1-201ENST00000584870 478 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AC007621.1-201ENST00000604544 437 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AL136363.1-201ENST00000605349 337 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 AC006504.8-201ENST00000621046 635 ntBASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
PDLIM7Q9NR12 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 TLK1P1-201ENST00000456760 2440 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 Y_RNA.460-201ENST00000384255 102 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 RPL23AP15-201ENST00000450202 459 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 HMGN1P13-201ENST00000505795 138 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AC106785.1-201ENST00000565935 262 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AC034268.2-201ENST00000571784 482 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 MIR5186-201ENST00000577504 120 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 SNORA74C-1-201ENST00000580726 201 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 SNORD39.3-201ENST00000584451 71 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AC017100.2-201ENST00000584628 355 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 RNU6-87P-201ENST00000607561 108 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AC019278.1-201ENST00000623516 479 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AL731566.1-201ENST00000620490 1937 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 AC090971.4-201ENST00000560291 1800 ntBASIC5.34□□□□□ -1.55
PDLIM7Q9NR12 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PDLIM7Q9NR12 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PDLIM7Q9NR12 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.34□□□□□ -1.56
PDLIM7Q9NR12 AC025574.1-201ENST00000554784 1653 ntBASIC5.34□□□□□ -1.56
PDLIM7Q9NR12 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 AP002907.1-201ENST00000606361 1430 ntBASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 TCP11X1-202ENST00000622971 1372 ntBASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 Y_RNA.72-201ENST00000362894 103 ntBASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 Y_RNA.162-201ENST00000363683 102 ntBASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 RNU6-767P-201ENST00000384132 107 ntBASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 RNA5SP187-201ENST00000384400 119 ntBASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 RNU6-952P-201ENST00000391164 108 ntBASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 MTND3P17-201ENST00000416968 344 ntBASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 AC092162.1-201ENST00000432828 434 ntBASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 RPS17P8-201ENST00000434525 335 ntBASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.33□□□□□ -1.56
PDLIM7Q9NR12 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms