Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSU72Q9NP77 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSU72Q9NP77 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSU72Q9NP77 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSU72Q9NP77 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSU72Q9NP77 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSU72Q9NP77 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 AC235565.1-201ENST00000456962 1325 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 RNA5SP391-201ENST00000363456 119 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 Y_RNA.193-201ENST00000363979 102 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 RNU6-1318P-201ENST00000365389 103 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 RNA5SP279-201ENST00000365513 117 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 Y_RNA.401-201ENST00000383965 117 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 Y_RNA.452-201ENST00000384202 108 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 AL359643.1-201ENST00000404109 423 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSU72Q9NP77 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 RPL6P29-201ENST00000414863 865 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSU72Q9NP77 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 MTCYBP9-201ENST00000431021 303 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 UBE2V1P13-201ENST00000436983 439 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 FABP5P14-201ENST00000437273 393 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 RAC1P7-201ENST00000445367 377 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 MTCO3P10-201ENST00000455912 772 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 AC068228.1-201ENST00000461723 211 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 AC006511.1-201ENST00000470614 315 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 AC017037.1-201ENST00000508460 471 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 AC018797.1-201ENST00000510791 255 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 RNU6-123P-201ENST00000516163 102 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 Y_RNA.667-201ENST00000516212 107 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 RNA5SP438-201ENST00000516561 112 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 RNU6-794P-201ENST00000517261 64 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 AC105031.1-201ENST00000518550 476 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 AP003122.3-201ENST00000526316 255 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 AL355598.1-201ENST00000604169 202 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 AL162431.4-201ENST00000604674 411 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 AC010680.4-201ENST00000605334 543 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 AC022893.3-201ENST00000607665 437 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 Z82243.1-201ENST00000609432 473 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 AC244100.1-202ENST00000621554 382 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 AL592148.3-201ENST00000608771 2646 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSU72Q9NP77 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 AC092079.1-201ENST00000558620 1985 ntBASIC5.31□□□□□ -1.56
SSU72Q9NP77 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.31□□□□□ -1.56
SSU72Q9NP77 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSU72Q9NP77 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 AP001642.1-201ENST00000624727 2117 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSU72Q9NP77 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSU72Q9NP77 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSU72Q9NP77 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 AC121333.1-201ENST00000567488 2709 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSU72Q9NP77 PANDAR-201ENST00000629595 1506 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 RNA5SP477-201ENST00000362639 119 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 RNU6-1252P-201ENST00000363054 104 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 RN7SKP250-201ENST00000363924 321 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 RNU6-1106P-201ENST00000390845 107 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 SSXP10-201ENST00000402595 565 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 RN7SKP86-201ENST00000410454 332 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 RPL37P10-201ENST00000412884 288 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 SKA2P1-201ENST00000425592 390 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 AL031584.1-201ENST00000447169 754 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.3□□□□□ -1.56
SSU72Q9NP77 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSU72Q9NP77 TRBVA-201ENST00000498804 316 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 HSD3BP3-201ENST00000514706 994 ntBASIC5.3□□□□□ -1.56
SSU72Q9NP77 RN7SKP24-201ENST00000515888 284 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms