Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 MYL6-211ENST00000548580 528 ntTSL 2 BASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 RPL23AP78-201ENST00000599928 470 ntBASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 AC123912.5-201ENST00000605470 343 ntBASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 SLC2A3P1-201ENST00000519666 1451 ntBASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
SCAF1Q9H7N4 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 Y_RNA.121-201ENST00000363309 113 ntBASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 RNA5SP382-201ENST00000363355 112 ntBASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 RNU6-512P-201ENST00000364438 103 ntBASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 RNA5SP512-201ENST00000364550 120 ntBASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 RN7SKP55-201ENST00000364888 307 ntBASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 SNORA70.8-201ENST00000384231 136 ntBASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 AC026310.1-201ENST00000396004 378 ntBASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 AC234775.1-201ENST00000454247 670 ntBASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 RN7SL492P-201ENST00000460700 295 ntBASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 AC004453.1-201ENST00000487895 408 ntBASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 SCARNA20.1-201ENST00000516009 138 ntBASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 MIR4437-201ENST00000581331 60 ntBASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 AC023043.3-201ENST00000593113 385 ntBASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 AC007159.1-201ENST00000566529 4706 ntBASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCAF1Q9H7N4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 AP003175.1-201ENST00000641383 6658 ntBASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 RN7SKP128-201ENST00000364270 303 ntBASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 EEF1GP7-201ENST00000422983 703 ntBASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 AC079354.2-201ENST00000453523 154 ntBASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 RN7SL751P-201ENST00000473281 284 ntBASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 RNU7-175P-201ENST00000515915 61 ntBASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 RNU6-537P-201ENST00000517277 103 ntBASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 AK6P2-201ENST00000549020 471 ntBASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 RPL7AP69-201ENST00000595306 806 ntBASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 AL645944.1-201ENST00000603857 493 ntBASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 MRPL57P3-201ENST00000619218 176 ntBASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 AC087894.3-201ENST00000623682 349 ntBASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
SCAF1Q9H7N4 AC090643.1-201ENST00000623600 3100 ntBASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 RNU6-899P-201ENST00000363947 107 ntBASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 SNORA40.19-201ENST00000390846 128 ntBASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 RNU6-754P-201ENST00000391166 107 ntBASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 DUTP5-201ENST00000406790 469 ntBASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 AC000089.1-201ENST00000424559 801 ntBASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 RPL12P12-201ENST00000424633 501 ntBASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 POU5F1P5-201ENST00000445059 658 ntBASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 AC073901.1-201ENST00000462471 408 ntBASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 AC008481.1-201ENST00000463278 396 ntBASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 AC104057.1-201ENST00000515547 497 ntBASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 MIR4470-201ENST00000583453 72 ntBASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 snoU18.1-201ENST00000629629 71 ntBASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC10.18□□□□□ -0.78
SCAF1Q9H7N4 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms