Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 PNPLA4P1-201ENST00000458328 305 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 RNA5SP246-201ENST00000458909 119 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 KRT19P6-201ENST00000510983 209 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 OR5M7P-201ENST00000526140 972 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AP003392.2-201ENST00000527269 208 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 BPTFP1-201ENST00000579209 492 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC090312.2-201ENST00000582687 378 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC015871.2-201ENST00000603605 948 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC092354.1-201ENST00000606057 376 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC099669.2-201ENST00000616549 437 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AL357080.1-201ENST00000617394 239 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC233309.1-201ENST00000619522 751 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC116618.1-201ENST00000634617 774 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
EBF3Q9H4W6 ASNSP1-201ENST00000518311 1939 ntBASIC4.31□□□□□ -1.72
EBF3Q9H4W6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 RNU6-797P-201ENST00000363101 109 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 TAF9BP1-201ENST00000396646 746 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 MTCO3P31-201ENST00000405526 789 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 RN7SKP159-201ENST00000410657 292 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 RNA5SP306-201ENST00000411087 107 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 OR51A3P-201ENST00000413596 924 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 MED14P1-201ENST00000430517 648 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 RPS24P8-201ENST00000431490 402 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 UBE2V1P8-201ENST00000437166 265 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC092809.1-201ENST00000441469 474 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 SNRPEP8-201ENST00000442866 260 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC003071.1-201ENST00000451219 789 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 OR6C5P-201ENST00000452388 923 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC133473.1-201ENST00000455173 299 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AP002812.1-201ENST00000495378 474 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 DYNLL1P6-201ENST00000503440 264 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC109471.1-201ENST00000511631 612 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 RNU6-718P-201ENST00000516166 105 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC087808.1-201ENST00000520501 361 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 PDCD5P1-201ENST00000543528 309 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 NPM1P47-201ENST00000560843 856 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AL606490.9-201ENST00000603331 271 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC055764.2-201ENST00000610089 670 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC104985.2-201ENST00000620598 500 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 OR5AK4P-201ENST00000635912 903 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 AC092079.1-201ENST00000558620 1985 ntBASIC4.3□□□□□ -1.72
EBF3Q9H4W6 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
EBF3Q9H4W6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms