Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AL157700.1-201ENST00000561973 1432 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC046144.1-201ENST00000478559 1853 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 RNU6-1005P-201ENST00000384519 107 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 SNORA44-201ENST00000384584 132 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 SNORD15B-201ENST00000384714 146 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 NUP35P2-201ENST00000416748 943 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC023128.2-201ENST00000420880 1223 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 GLRXP1-201ENST00000423261 334 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC005189.1-201ENST00000431286 310 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 SETP5-201ENST00000437270 562 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 SDR42E1P3-201ENST00000438345 502 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 HMGB1P48-201ENST00000446155 598 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 NPM1P49-201ENST00000448027 714 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 RPL7P55-201ENST00000450522 746 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 MTND2P39-201ENST00000457230 764 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC010401.1-201ENST00000463867 348 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 RPL23AP14-201ENST00000468281 468 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AL035404.1-201ENST00000497982 568 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC112518.2-201ENST00000508565 425 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 FABP5P12-201ENST00000515543 389 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 RN7SKP283-201ENST00000517197 270 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AP001636.2-201ENST00000525517 696 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AP002404.1-201ENST00000532005 451 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC022080.3-201ENST00000544433 482 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AP000919.1-202ENST00000581139 1264 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC124283.4-201ENST00000581815 456 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC006254.3-201ENST00000603353 884 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 BNIP3P11-201ENST00000603878 563 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC112503.2-201ENST00000609005 552 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 MIR7153-201ENST00000637758 57 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 MIR622-201ENST00000638396 96 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 MFSD8-213ENST00000641134 1327 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 AC118273.1-201ENST00000525324 3006 ntBASIC3.37□□□□□ -1.87
NXF3Q9H4D5 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NXF3Q9H4D5 RNA5SP391-201ENST00000363456 119 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 RNU1-140P-201ENST00000365040 165 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AL035405.1-201ENST00000400795 710 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 DNAJC19P6-201ENST00000401853 280 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 BX664727.1-201ENST00000416024 466 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 RPL31P12-201ENST00000422587 358 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 RPL35AP12-201ENST00000425362 338 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 BX679664.1-201ENST00000434429 253 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 ARL5AP2-201ENST00000444698 533 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 RPL29P29-201ENST00000448725 423 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 HMGN1P18-201ENST00000457642 277 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC008379.1-201ENST00000463655 464 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 RPL21P47-201ENST00000483696 477 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 MTND3P3-201ENST00000505004 126 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC090425.2-201ENST00000608818 501 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC006386.2-201ENST00000624491 75 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC012005.1-201ENST00000624575 75 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 MIR4496-201ENST00000635896 61 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 FAM157B-203ENST00000639350 358 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.36□□□□□ -1.87
NXF3Q9H4D5 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NXF3Q9H4D5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms