Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 NIFKP8-201ENST00000560500 874 ntBASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 AC133794.1-201ENST00000602731 914 ntBASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 AC090425.2-201ENST00000608818 501 ntBASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 uc_338.1-201ENST00000612113 180 ntBASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 AC080188.3-201ENST00000624842 748 ntBASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.72□□□□□ -1.81
CCSER1Q9C0I3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.71□□□□□ -1.81
CCSER1Q9C0I3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.71□□□□□ -1.81
CCSER1Q9C0I3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CCSER1Q9C0I3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CCSER1Q9C0I3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.81
CCSER1Q9C0I3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
CCSER1Q9C0I3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 SNORD46.1-201ENST00000364139 104 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 RNU6-374P-201ENST00000364146 108 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 U6.112-201ENST00000384129 70 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AL138880.1-201ENST00000405824 642 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 HSFY4P-201ENST00000415994 1181 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AL049610.1-201ENST00000423374 372 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AC006946.1-201ENST00000429106 328 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AL662791.1-201ENST00000441992 928 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 GXYLT1P1-201ENST00000446657 490 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 RPS17P11-201ENST00000474297 293 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 RPS4XP22-201ENST00000480755 780 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 APOOP4-201ENST00000513530 597 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 RN7SKP244-201ENST00000516513 307 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 RNU6-334P-201ENST00000517072 102 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AC104027.1-201ENST00000521887 300 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AP004371.1-201ENST00000525240 214 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 BNIP3P22-201ENST00000593399 556 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 MTATP6P2-201ENST00000603319 678 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 ELOCP35-201ENST00000604289 336 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 HSPE1P14-201ENST00000605812 302 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 AP005229.2-201ENST00000609980 697 ntBASIC3.71□□□□□ -1.82
CCSER1Q9C0I3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 RNVU1-3-201ENST00000364313 161 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 RNU6-354P-201ENST00000383862 107 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 RNU6-610P-201ENST00000384264 107 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 RNU2-71P-201ENST00000411395 189 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 HMGN1P24-201ENST00000412282 298 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 RPL31P12-201ENST00000422587 358 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 HMGB1P12-201ENST00000438594 598 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 TXNP1-201ENST00000441872 371 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 SEPT14P24-201ENST00000447236 180 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 Z99127.3-201ENST00000448158 395 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 snoU13.3-201ENST00000459441 104 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 AC091153.1-201ENST00000466297 402 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 PRDX3P4-201ENST00000470828 747 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 ARL2BPP5-201ENST00000523141 481 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 MIR4789-201ENST00000577469 82 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 MIR4276-201ENST00000584832 70 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 AC005776.1-201ENST00000603164 290 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 AC005014.3-201ENST00000605985 190 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 AL109620.1-201ENST00000618738 1197 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms