Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VRK1Q99986 MTATP6P23-201ENST00000440153 476 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK1Q99986 MTND4P18-201ENST00000447010 465 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.44□□□□□ -1.7
VRK1Q99986 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK1Q99986 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VRK1Q99986 BX842559.2-201ENST00000451418 605 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 FABP3P2-201ENST00000453169 399 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 RPL38P1-201ENST00000460914 211 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK1Q99986 RPS3AP14-201ENST00000483907 780 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 AC007182.2-201ENST00000489251 402 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK1Q99986 AC009646.1-201ENST00000510455 318 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.44□□□□□ -1.7
VRK1Q99986 AC010342.1-201ENST00000514047 877 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.44□□□□□ -1.7
VRK1Q99986 AP003072.2-201ENST00000527756 676 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 PDCD5P1-201ENST00000543528 309 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.44□□□□□ -1.7
VRK1Q99986 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VRK1Q99986 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.44□□□□□ -1.7
VRK1Q99986 MIR3167-201ENST00000579623 85 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.44□□□□□ -1.7
VRK1Q99986 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.44□□□□□ -1.7
VRK1Q99986 MIR98-201ENST00000606724 119 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 AC133644.2-201ENST00000608142 540 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 OR6R2P-201ENST00000609216 300 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 AC017083.3-201ENST00000609955 700 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 AC099669.2-201ENST00000616549 437 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.44□□□□□ -1.7
VRK1Q99986 AL138713.1-201ENST00000624026 2130 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 AC091905.1-201ENST00000624400 311 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.44□□□□□ -1.7
VRK1Q99986 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VRK1Q99986 AC023421.1-201ENST00000590535 1785 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.44□□□□□ -1.7
VRK1Q99986 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 TLK1P1-201ENST00000456760 2440 ntBASIC4.44□□□□□ -1.7
VRK1Q99986 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VRK1Q99986 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VRK1Q99986 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VRK1Q99986 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VRK1Q99986 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VRK1Q99986 AC018529.3-201ENST00000624212 2254 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
VRK1Q99986 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VRK1Q99986 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.43□□□□□ -1.7
VRK1Q99986 AC107068.1-201ENST00000563286 4218 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK1Q99986 RNU6-181P-201ENST00000363225 107 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 RNA5SP455-201ENST00000365190 119 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 RNU6-356P-201ENST00000384140 107 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 Y_RNA.450-201ENST00000384198 113 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 RNU6-114P-201ENST00000384704 105 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 SNORD115-47-201ENST00000391226 86 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 AL133270.1-201ENST00000402635 279 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 AL080315.1-201ENST00000406055 466 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK1Q99986 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK1Q99986 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.43□□□□□ -1.7
VRK1Q99986 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.43□□□□□ -1.7
VRK1Q99986 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.43□□□□□ -1.7
VRK1Q99986 AC092832.1-201ENST00000422934 400 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 AC019097.1-201ENST00000424783 735 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.43□□□□□ -1.7
VRK1Q99986 AC002486.1-201ENST00000435098 391 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.43□□□□□ -1.7
VRK1Q99986 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK1Q99986 BTF3P6-201ENST00000448054 499 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.43□□□□□ -1.7
VRK1Q99986 UBDP1-202ENST00000457888 382 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 snoU13.3-201ENST00000459441 104 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 RPL35P6-201ENST00000490024 372 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 ARL4AP2-201ENST00000507378 601 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VRK1Q99986 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK1Q99986 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.43□□□□□ -1.7
VRK1Q99986 ARL2BPP6-201ENST00000512757 439 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 AC017037.2-201ENST00000513850 890 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 RNU6-445P-201ENST00000516949 107 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 OR5AQ1P-201ENST00000527596 927 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VRK1Q99986 AP003034.1-201ENST00000534621 422 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 RPS3AP4-201ENST00000555161 764 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.43□□□□□ -1.7
VRK1Q99986 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK1Q99986 OR1F2P-201ENST00000570470 933 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.43□□□□□ -1.7
VRK1Q99986 AC011447.4-201ENST00000587562 111 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VRK1Q99986 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VRK1Q99986 KC877982.1-201ENST00000602313 470 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.43□□□□□ -1.7
VRK1Q99986 AC055876.5-201ENST00000605667 259 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 AP002360.4-201ENST00000606980 481 ntBASIC4.43□□□□□ -1.7
VRK1Q99986 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VRK1Q99986 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.43□□□□□ -1.7
VRK1Q99986 MIR3688-2-201ENST00000636963 87 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms