Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.35□□□□□ -1.87
NPAS2Q99743 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.35□□□□□ -1.87
NPAS2Q99743 MIR4789-201ENST00000577469 82 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AC098483.2-201ENST00000603158 454 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.35□□□□□ -1.87
NPAS2Q99743 AC019176.2-201ENST00000611579 315 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.35□□□□□ -1.87
NPAS2Q99743 AL512506.1-201ENST00000613918 449 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AC243312.2-201ENST00000623340 601 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AC110801.1-201ENST00000623590 212 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AC093875.1-201ENST00000623688 504 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AL121594.5-201ENST00000631724 573 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AC091152.2-201ENST00000591628 2569 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS2Q99743 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS2Q99743 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
NPAS2Q99743 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.34□□□□□ -1.87
NPAS2Q99743 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
NPAS2Q99743 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.34□□□□□ -1.87
NPAS2Q99743 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPAS2Q99743 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPAS2Q99743 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPAS2Q99743 FRG1CP-201ENST00000358464 769 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 RNA5SP258-201ENST00000362750 119 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 RNU6-989P-201ENST00000362756 107 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 RNU6-115P-201ENST00000364310 107 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
NPAS2Q99743 MTND4LP20-201ENST00000402379 270 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 RPL23AP47-201ENST00000408017 460 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 RPL23AP82-202ENST00000427528 469 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NPAS2Q99743 USP9YP31-201ENST00000431405 881 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 AL159987.2-201ENST00000432754 307 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 AC234064.1-201ENST00000436312 247 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.34□□□□□ -1.87
NPAS2Q99743 SNORD105B-201ENST00000458770 79 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 CENPBD1P1-201ENST00000464061 469 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.34□□□□□ -1.87
NPAS2Q99743 AC048346.1-201ENST00000510247 144 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 IGKV2-23-201ENST00000518729 323 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.34□□□□□ -1.87
NPAS2Q99743 AC006518.1-201ENST00000541449 943 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.34□□□□□ -1.87
NPAS2Q99743 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NPAS2Q99743 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.34□□□□□ -1.87
NPAS2Q99743 AC093510.2-201ENST00000562820 896 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.34□□□□□ -1.87
NPAS2Q99743 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.34□□□□□ -1.87
NPAS2Q99743 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.34□□□□□ -1.87
NPAS2Q99743 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.34□□□□□ -1.87
NPAS2Q99743 AC002487.1-201ENST00000604565 994 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.34□□□□□ -1.87
NPAS2Q99743 AC073968.1-201ENST00000618594 637 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 AC244258.1-201ENST00000637553 1071 ntBASIC3.34□□□□□ -1.87
NPAS2Q99743 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPAS2Q99743 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
NPAS2Q99743 AC138915.3-201ENST00000562908 1389 ntBASIC3.34□□□□□ -1.88
NPAS2Q99743 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
NPAS2Q99743 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NPAS2Q99743 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
NPAS2Q99743 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NPAS2Q99743 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.33□□□□□ -1.88
NPAS2Q99743 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS2Q99743 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS2Q99743 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS2Q99743 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS2Q99743 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
NPAS2Q99743 RNU6-353P-201ENST00000364266 108 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS2Q99743 RNU6-354P-201ENST00000383862 107 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 RNU6-610P-201ENST00000384264 107 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 MIR218-2-201ENST00000385006 110 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 RNU6-821P-201ENST00000390995 107 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 AL139098.1-201ENST00000407291 389 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 AL023807.1-201ENST00000407932 359 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.33□□□□□ -1.88
NPAS2Q99743 MTCO3P12-201ENST00000416718 547 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.33□□□□□ -1.88
NPAS2Q99743 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.33□□□□□ -1.88
NPAS2Q99743 RPS6P14-201ENST00000425165 719 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 ATP5JP1-201ENST00000431631 322 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 AC073063.1-201ENST00000434352 607 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.33□□□□□ -1.88
NPAS2Q99743 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.33□□□□□ -1.88
NPAS2Q99743 RPL23AP16-201ENST00000441715 421 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS2Q99743 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.33□□□□□ -1.88
NPAS2Q99743 AC011352.3-201ENST00000505162 593 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 SNORA64.4-201ENST00000516632 81 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 RNA5SP468-201ENST00000516782 93 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 AC107934.2-201ENST00000518653 310 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.33□□□□□ -1.88
NPAS2Q99743 AC104027.1-201ENST00000521887 300 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 ZNF705CP-201ENST00000530515 889 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS2Q99743 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS2Q99743 AC128687.1-201ENST00000605304 619 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 AC092354.2-201ENST00000607786 514 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 U4.6-201ENST00000621618 127 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms