Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RPL7L1P8-201ENST00000469911 741 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 BZW1P2-201ENST00000473537 826 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 RPSAP50-201ENST00000481955 852 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AC110792.1-201ENST00000491826 472 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 MLLT10P2-201ENST00000506434 249 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 HMGN2P6-201ENST00000551091 273 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AL110118.1-201ENST00000553543 400 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 EDDM3DP-201ENST00000554692 434 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AC006116.3-201ENST00000592968 361 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AC020914.4-201ENST00000597690 277 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AC013444.2-201ENST00000603317 787 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AC092354.2-201ENST00000607786 514 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AL391261.4-201ENST00000616012 481 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 MIR6886-201ENST00000619864 61 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 AP002799.1-201ENST00000623552 423 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 U6.98-201ENST00000637157 84 ntBASIC3.79□□□□□ -1.8
CMTM3Q96MX0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.79□□□□□ -1.8
CMTM3Q96MX0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 C4BPAP1-201ENST00000415474 1893 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 RNA5SP305-201ENST00000362665 119 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 Y_RNA.169-201ENST00000363745 96 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 SNORA71.2-201ENST00000364941 134 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 Y_RNA.548-201ENST00000384656 105 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 MIR135A2-201ENST00000384854 100 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 SNORD66.1-201ENST00000391230 76 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC007066.1-201ENST00000392902 381 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC007390.1-201ENST00000415722 356 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AL161631.1-201ENST00000417933 486 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 MFSD13B-201ENST00000420133 1290 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 MTCO1P39-201ENST00000426148 480 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC079780.1-201ENST00000428259 207 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 RPEP2-201ENST00000432149 701 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AL627308.1-201ENST00000435693 821 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 RSU1P2-202ENST00000437884 485 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC114495.1-201ENST00000441274 436 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC112498.1-201ENST00000444401 332 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 RPL23AP43-201ENST00000446445 471 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC239367.2-201ENST00000447309 705 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC073850.1-201ENST00000449243 255 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AL136097.1-201ENST00000456945 913 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC091564.1-201ENST00000464563 479 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 RPL30P6-201ENST00000475925 342 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 RPS4XP14-201ENST00000493072 781 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC034222.1-201ENST00000494052 532 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 BNIP3P41-201ENST00000503774 571 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 RN7SKP147-201ENST00000517154 244 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC103783.1-201ENST00000520506 373 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AP004247.1-201ENST00000531556 1289 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 OR4K8P-201ENST00000578842 1048 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC068313.1-201ENST00000604028 1008 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AC025811.1-201ENST00000604312 472 ntBASIC3.78□□□□□ -1.8
CMTM3Q96MX0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.78□□□□□ -1.8
CMTM3Q96MX0 SDR42E1P1-201ENST00000611327 477 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms