Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.83□□□□□ -1.8
USP47Q96K76 NF1P5-201ENST00000588287 448 ntBASIC3.83□□□□□ -1.8
USP47Q96K76 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.83□□□□□ -1.8
USP47Q96K76 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.83□□□□□ -1.8
USP47Q96K76 AL021368.2-201ENST00000606125 5352 ntBASIC3.83□□□□□ -1.8
USP47Q96K76 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP47Q96K76 TAB3P1-202ENST00000452645 1634 ntBASIC3.83□□□□□ -1.8
USP47Q96K76 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
USP47Q96K76 AL672167.1-206ENST00000356293 943 ntBASIC3.82□□□□□ -1.8
USP47Q96K76 RN7SKP44-201ENST00000363602 316 ntBASIC3.82□□□□□ -1.8
USP47Q96K76 RNU4-31P-201ENST00000384211 141 ntBASIC3.82□□□□□ -1.8
USP47Q96K76 AC004987.3-201ENST00000413879 771 ntBASIC3.82□□□□□ -1.8
USP47Q96K76 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.82□□□□□ -1.8
USP47Q96K76 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.82□□□□□ -1.8
USP47Q96K76 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.82□□□□□ -1.8
USP47Q96K76 BX276092.4-201ENST00000452056 248 ntBASIC3.82□□□□□ -1.8
USP47Q96K76 RN7SL283P-201ENST00000489055 303 ntBASIC3.82□□□□□ -1.8
USP47Q96K76 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.82□□□□□ -1.8
USP47Q96K76 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.82□□□□□ -1.8
USP47Q96K76 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.82□□□□□ -1.8
USP47Q96K76 MIR3186-201ENST00000577404 85 ntBASIC3.82□□□□□ -1.8
USP47Q96K76 MIR4458-201ENST00000578872 75 ntBASIC3.82□□□□□ -1.8
USP47Q96K76 AC115085.1-201ENST00000588924 229 ntBASIC3.82□□□□□ -1.8
USP47Q96K76 ZNF92P3-201ENST00000596594 954 ntBASIC3.82□□□□□ -1.8
USP47Q96K76 ABI1P1-201ENST00000603375 1120 ntBASIC3.82□□□□□ -1.8
USP47Q96K76 AC009032.1-201ENST00000617574 431 ntBASIC3.82□□□□□ -1.8
USP47Q96K76 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
USP47Q96K76 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
USP47Q96K76 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
USP47Q96K76 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
USP47Q96K76 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.82□□□□□ -1.8
USP47Q96K76 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.82□□□□□ -1.8
USP47Q96K76 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.82□□□□□ -1.8
USP47Q96K76 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP47Q96K76 AC008725.1-201ENST00000605123 2263 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP47Q96K76 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP47Q96K76 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.81□□□□□ -1.8
USP47Q96K76 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
USP47Q96K76 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
USP47Q96K76 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP47Q96K76 AL589655.1-201ENST00000405398 482 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.81□□□□□ -1.8
USP47Q96K76 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.81□□□□□ -1.8
USP47Q96K76 AL121890.1-201ENST00000435457 205 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 ELOCP11-201ENST00000436690 332 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 ELOCP16-201ENST00000444494 332 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 RPL7P36-201ENST00000444633 681 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 RPL23AP31-201ENST00000456160 467 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 SNORD109B-201ENST00000458961 67 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 SNORD109A-201ENST00000459128 67 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.81□□□□□ -1.8
USP47Q96K76 MTCO1P31-201ENST00000506355 492 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.81□□□□□ -1.8
USP47Q96K76 AP001207.1-201ENST00000524051 481 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.81□□□□□ -1.8
USP47Q96K76 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.81□□□□□ -1.8
USP47Q96K76 AC245128.3-201ENST00000594721 748 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 AC012119.1-201ENST00000603184 222 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 AC107294.3-201ENST00000609211 526 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP47Q96K76 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.81□□□□□ -1.8
USP47Q96K76 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.81□□□□□ -1.8
USP47Q96K76 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.81□□□□□ -1.8
USP47Q96K76 MTND5P27-201ENST00000428871 1720 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP47Q96K76 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.81□□□□□ -1.8
USP47Q96K76 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP47Q96K76 AC009487.2-201ENST00000420969 6821 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 AC108206.1-201ENST00000570186 4159 ntBASIC3.81□□□□□ -1.8
USP47Q96K76 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP47Q96K76 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP47Q96K76 RNU6-859P-201ENST00000362728 107 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
USP47Q96K76 AL355379.1-201ENST00000405542 640 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP47Q96K76 RNA5SP508-201ENST00000411327 119 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 AC010385.1-201ENST00000412374 256 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.8□□□□□ -1.8
USP47Q96K76 PTP4A1P5-201ENST00000420305 455 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 AL159169.1-201ENST00000421119 127 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.8□□□□□ -1.8
USP47Q96K76 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.8□□□□□ -1.8
USP47Q96K76 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.8□□□□□ -1.8
USP47Q96K76 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.8□□□□□ -1.8
USP47Q96K76 RNU6-775P-201ENST00000459318 96 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 RPL23AP44-201ENST00000482216 473 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 RPL31P13-201ENST00000484151 370 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.8□□□□□ -1.8
USP47Q96K76 AC022790.1-201ENST00000522872 204 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.8□□□□□ -1.8
USP47Q96K76 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.8□□□□□ -1.8
USP47Q96K76 AL355836.1-201ENST00000555951 870 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 AGGF1P8-201ENST00000562979 1000 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 MTND4LP24-201ENST00000572277 291 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP47Q96K76 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.8□□□□□ -1.8
USP47Q96K76 CR381653.2-201ENST00000624041 768 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.8□□□□□ -1.8
USP47Q96K76 AC009452.1-201ENST00000640823 606 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms