Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RNU1-61P-201ENST00000516107 151 ntBASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 RNA5SP208-201ENST00000516156 78 ntBASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 SCARNA14-201ENST00000516903 136 ntBASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 MIR2116-201ENST00000517221 80 ntBASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 PARP1P2-201ENST00000556806 195 ntBASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 AC009101.1-201ENST00000568135 242 ntBASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 AC022022.2-201ENST00000602989 360 ntBASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 AC010738.1-201ENST00000604970 987 ntBASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 AC010975.3-201ENST00000618727 978 ntBASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 AL121895.2-201ENST00000619558 447 ntBASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 MTCO1P23-201ENST00000415223 1526 ntBASIC3.7□□□□□ -1.82
PDLIM5Q96HC4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AL049780.3-201ENST00000624612 1583 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 MTND4P34-201ENST00000572715 1371 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 RNU4-28P-201ENST00000364739 141 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 RNA5SP283-201ENST00000365604 119 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 Y_RNA.472-201ENST00000384322 102 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 MIR513B-201ENST00000385136 84 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 RNU6-1242P-201ENST00000391052 103 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 PTMAP5-201ENST00000393073 333 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 RPL30P2-201ENST00000414021 291 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 C1DP1-201ENST00000426049 402 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 VN1R10P-201ENST00000447106 875 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 MTND2P19-201ENST00000449129 1012 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 PTGES3P5-201ENST00000455109 434 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AC092757.1-201ENST00000467293 467 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 RN7SL323P-201ENST00000494712 295 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 MLLT10P2-201ENST00000506434 249 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 HMGB3P15-201ENST00000507326 574 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 MTCO1P35-201ENST00000515270 228 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 RN7SKP83-201ENST00000516512 178 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AC126177.3-201ENST00000551839 688 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AL389895.1-201ENST00000554127 252 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 GTF2IP8-201ENST00000560687 584 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 CCDC58P3-201ENST00000590792 430 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AL136295.6-201ENST00000610486 658 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AC005332.6-201ENST00000613178 446 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AL355493.4-201ENST00000618530 292 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 U7.8-201ENST00000619968 63 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AL590240.3-201ENST00000621416 943 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 AC011330.2-201ENST00000621680 635 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 OR1S1-201ENST00000624470 978 ntBASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PDLIM5Q96HC4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PDLIM5Q96HC4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDLIM5Q96HC4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDLIM5Q96HC4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDLIM5Q96HC4 AC024560.2-201ENST00000507981 1497 ntBASIC3.68□□□□□ -1.82
PDLIM5Q96HC4 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms